| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_0415 |
|---|
| Symbol | |
|---|
| ID | 5333847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 1879197 |
|---|
| End bp | 1881161 |
|---|
| Gene Length | 1965 bp |
|---|
| Protein Length | 654 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | acetate--CoA ligase |
|---|
| Protein accession | YP_001360169 |
|---|
| Protein GI | 152964385 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0163435 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.17128 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCG ACCCGAGCAC CCAGCAGGAG CCCACCACCG GCTCCGGGAC CTTCGCCCCG
GACCCGGAGT TCGCGGCCGG GGCCGTCGCG CGGGCCGACC TGTACGACCG GGCCGCCGCC
GACCGGCTCG GGTTCTGGGC GGAGGTGGCC CGTGAGCACG TCACCTGGGA CACCGACTTC
GACGAGGTCC TGGACTGGTC GAACCCGCCG TTCGCGAAGT GGTTCGTCGG CGGGAAGCTC
AACGTCGCGG TGAACTGCGT CGACCGCCAC GTCGCCGCCG GGAACGGCGA GCGCGTCGCC
CTCCACTTCG AGGGCGAACC CGGCGACACC CGGGCGGTCA CCTACGCGCA GCTGCACGAG
CAGGTGCAGC GGGCTGCGAA CGTGCTGGCC GGGCTGGGGG TGCGCGCCGG GGACCGGGTC
GCGATCTACC TGCCGATGCT CGTGGAGTCG GTGGTGGCGA TGCTGGCGTG CGCGCGCCTG
GGCGCGGCGC ACTCGGTGGT GTTCGGCGGG TTCTCCGCCG ACGCGCTGCA CTCCCGCATC
GACGACGCCC AGGCCAAGGT CGTCATCACC TGCGACGGTT CCTACCGCCG CGGCAAGCCC
ACGACCCTCA AGCCCGCCGT GGACGCGGCG CTGGCCAAGG GCGCCCCGTC GGTGACCGGC
GTCCTCGTCG TGAAGCGCAA CGGCGAGGCC GTGGACTGGG TCGAGGGCCG CGACGTGTGG
TGGGACGAGG CGCTGGCCGC GGCCGCGCCC GTGCACGAGG CGGAGGCCTT CGACGCGGAG
AACCCGCTGT TCGTCCTCTA CACCTCCGGC ACCACGGGCA AGCCCAAGGG CATCCTGCAC
ACCTCCGGGG GCTACCTCGT CCAGACCGCG TACACGACGC GCACCGTCTT CGACGTGCAG
CCCGGGCGCG ACGTGTACTG GTGCACCGCC GACGTCGGCT GGGTCACCGG GCACAGCTAC
GTCGTCTACG GCCCGCTGGC CAACGGCCTG ACCCAGGTGA TCTACGAGGG GACCCCCGAC
ACCCCCGACA AGGACCGCTG GTGGTCGCTG GTGGAGAAGT ACGGCGTCAC CGTCCTCTAC
ACCGCGCCCA CGGCGATCCG GACCTGCATG AAGTGGGGCG AGGAGTACCC CGCCCGCCAC
GACCTGTCCT CGCTGCGGGT GCTGGGCAGC GTGGGGGAGA ACATCAACCC CGAGGCGTGG
TCCTGGTACC GCCGCGTCAT CGGCGCCGAC CGCACCCCGA TCGTCGACAC CTGGTGGCAG
ACCGAGACCG GCGCGCAGAT GATCGCCCCG CTGCCCGGGG TCACCAGCCT CAAGCCGGGT
TCGGCGCAGG TCCCGCTGCC GGGGATCGTC GCCGAGGTCG TCGACGACGC CGGTGAGCCC
GTCCCGCACG GGCAGGCCGG GTACCTCGTC CTGAGCGAGC CGTGGCCGGC GATGACGCGC
GGCATCTGGG GCGACGAGCA GCGGTTCCGG GACACCTACT GGGCCCGCTT CCCGGGCCGG
TACTTCGCCG GCGACGGCGC CAAGCGCGAC GAGGACGGCG ACATCTGGCT GCTGGGCCGC
GTCGACGACG TCATGAACGT CTCCGGGCAC CGCCTCTCCA CCGCCGAGAT CGAGTCGGCC
CTGGTCAGCC ACCCCGACGT CGCCGAGGCC GCCGTCGTGG GGGCGACCGA CGAGACGACC
GGGCAGGCCG TCGTGGCCTT CGTCATCCTC CGCGGCGGCC ACGAGGAGGG GCCGGGGACC
GTCGCGGCCC TGCGCGACCA CGTCGCGAAG GAGATCGGCC CCATCGCCAA GCCGAAGTCG
ATCATGGTGG TGGCGGAGCT GCCGAAGACC CGCTCGGGCA AGATCATGCG CCGCCTGCTG
CGCGACGTCG CCGAGCACCG CCCCACCGGC GACGTCACGA CCCTGACCGA CTCCACGGTC
ATGGACGCCA TCACCGCCGG GATGAACGCC CCCGCCGGGG ACTGA
|
|---|
| Protein sequence | MSTDPSTQQE PTTGSGTFAP DPEFAAGAVA RADLYDRAAA DRLGFWAEVA REHVTWDTDF
DEVLDWSNPP FAKWFVGGKL NVAVNCVDRH VAAGNGERVA LHFEGEPGDT RAVTYAQLHE
QVQRAANVLA GLGVRAGDRV AIYLPMLVES VVAMLACARL GAAHSVVFGG FSADALHSRI
DDAQAKVVIT CDGSYRRGKP TTLKPAVDAA LAKGAPSVTG VLVVKRNGEA VDWVEGRDVW
WDEALAAAAP VHEAEAFDAE NPLFVLYTSG TTGKPKGILH TSGGYLVQTA YTTRTVFDVQ
PGRDVYWCTA DVGWVTGHSY VVYGPLANGL TQVIYEGTPD TPDKDRWWSL VEKYGVTVLY
TAPTAIRTCM KWGEEYPARH DLSSLRVLGS VGENINPEAW SWYRRVIGAD RTPIVDTWWQ
TETGAQMIAP LPGVTSLKPG SAQVPLPGIV AEVVDDAGEP VPHGQAGYLV LSEPWPAMTR
GIWGDEQRFR DTYWARFPGR YFAGDGAKRD EDGDIWLLGR VDDVMNVSGH RLSTAEIESA
LVSHPDVAEA AVVGATDETT GQAVVAFVIL RGGHEEGPGT VAALRDHVAK EIGPIAKPKS
IMVVAELPKT RSGKIMRRLL RDVAEHRPTG DVTTLTDSTV MDAITAGMNA PAGD
|
|---|
| |