Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_0182 |
Symbol | |
ID | 5335984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 2129790 |
End bp | 2131475 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | thiamine pyrophosphate protein TPP binding domain protein |
Protein accession | YP_001359937 |
Protein GI | 152964153 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.217855 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCCG CACCGGCCCC GGACACCTCG ACCACCACCG TCGGGGGCTA CCTCGGCCGC CGCCTCGAGC AGCTCGGCGT CGGCCACGTC TTCGGACTGC CGGGCGACTT CAACCTCGCC CTGCTCGACG AGGTGCTGGC CGCGACCGGC CTGCGCTGGG TCGGGTCGTC CAACGAGCTC AACGCCGGGT ACGCCGCCGA CGGGTACGCG CGCCTGCGGC GCGGGCCGGC GGCGGTGGTC ACGACGTTCG GCGTCGGGGA GCTGTCCGCG GTCAACGCCC TCGCCGGCAG CTACGCCGAG GACGTCCCCG TCGTGCACGT CGTCGGGCTC CCCCCGACCA CCGCGATGAG CCGGGGGGCG CTGCTGCACC ACTCCCTCGC CGACGGCGAC TTCGGGCACT TCGTGCGGAT CGCCGCCGAG GTGACGGCCT CGGCCGTGGT CGTGCGGGCC CAGGGGGCGA CGACCGCGAT CGACCAGGCC CTGCTCACCG CGGTCGGCAC GTCGAAACCC GTCTACCTCG GCGTCCCCGC CGACGTCGCC GTCCACCCCG TCCCGGCCGC CCCGCTGTCG CGCCCGCTGC GCGTCCTGCG CAGCGACGCG GGGGCGGCGG AGGAGTTCCG CACCGCGCTC GCGCAGTTCC TCGGGGACGC CCCCGAGGTC ACCGTCCTCG CCGGTCCCCG GCTGCACCGG CGGAACCTGG AGGACCTCGT GCGGGCCATC GCCGCCCAGA ACGGCGTCCG GGTCGCGACG CAGTCGGCGT CCAAGGCGAT GCTCGACGAG TCCCACCCCG CGAACCTCGG GGTGTACGCG GGGGAGTTCA CCCGCTCCGC CCGGACCCGT CGCGCCGTCG ACGGGGCCCG GCCGCTCGTC CTCGCGGGGG TGCTGATGAG CGACTTCCTC ACCGGCTCGT TCAGCCACGC CTTCGACCCG GAGGCCTCGG TGGACCTGCA GCTGGACCAC GCCCGCATCG CGGGGACGGC GTTCTACGGC CTGTACCTGG AGGAGTCGCT GCGCATCCTG GAGGAGGTCC TCGACGCGCG CTCGCCCCGT CCCGGGCCGC TGCCGCGCCA GGAGGTCCCG GCCCTCGCAC CGCACGTGCC CGCCGAACCC GACGGCCCGC TGACCCACGC CGACCTCTGG CCGCTGCTGC AGCGCTGGCT GAACCCGGGC ACCCTGCTCG TCGCCGAGGC GGGGACCTCG TTCTACGGGG CGCTGGAACT CACCACCCCC GACGGCTGCG ACCTGCTGGG GCAGCCGGTC TGGTCCTCCA TCGGGTACAC GCTGCCCGCG ACCCTCGGCG CGATGCTCGC CCGTCCCGGC CGGGAGACCG TCCTGGTCAT CGGCGACGGT TCCGCGCAGC TGACGATCCA GGAACTCGGG CGGATCCTCG CCGAGGGCCT CACCCCGACG ATCCTGCTGG TCAACAACTC CGGCTACACC GTGGAACGGG CCATCCGCAG CCCCGAGGCG GTCTACCAGG ACGTCGTCGC GTGGGACTGG ACGAAGCTGC CCGCGGCGCT GGGTTCGCCG GGGACCCCCA CCTACCGGGC CGCCACCCCC GCGGACCTCG TCGAGGTCCT GGGGAAGGTC CGGGCCGACC CCGACCACGC GGCGTTCGTG GAACTGCTGC TGCCGCGCGA CGACGCCCCC GACTCCCTGG TCCAGCTCGC CCGCAGCGTC CGCTGA
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Protein sequence | MTPAPAPDTS TTTVGGYLGR RLEQLGVGHV FGLPGDFNLA LLDEVLAATG LRWVGSSNEL NAGYAADGYA RLRRGPAAVV TTFGVGELSA VNALAGSYAE DVPVVHVVGL PPTTAMSRGA LLHHSLADGD FGHFVRIAAE VTASAVVVRA QGATTAIDQA LLTAVGTSKP VYLGVPADVA VHPVPAAPLS RPLRVLRSDA GAAEEFRTAL AQFLGDAPEV TVLAGPRLHR RNLEDLVRAI AAQNGVRVAT QSASKAMLDE SHPANLGVYA GEFTRSARTR RAVDGARPLV LAGVLMSDFL TGSFSHAFDP EASVDLQLDH ARIAGTAFYG LYLEESLRIL EEVLDARSPR PGPLPRQEVP ALAPHVPAEP DGPLTHADLW PLLQRWLNPG TLLVAEAGTS FYGALELTTP DGCDLLGQPV WSSIGYTLPA TLGAMLARPG RETVLVIGDG SAQLTIQELG RILAEGLTPT ILLVNNSGYT VERAIRSPEA VYQDVVAWDW TKLPAALGSP GTPTYRAATP ADLVEVLGKV RADPDHAAFV ELLLPRDDAP DSLVQLARSV R
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