| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_0121 |
|---|
| Symbol | |
|---|
| ID | 5333740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 2194489 |
|---|
| End bp | 2195901 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | |
|---|
| Product | putative PAS/PAC sensor protein |
|---|
| Protein accession | YP_001359876 |
|---|
| Protein GI | 152964092 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.660456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.370084 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCTCGC CACCGGCCCC GCCCGGGCCG ACCGGTGCCT CCCCGGCGCG GTCGGGCCGC
CGGGTGCTCC TGCCCCCCGA CTCGGGTGCT CCCCGGCGGG CCCGCCGGCT GGTGCGCGAG
GTCCTGGAGG GAGCCGGGCG CGAGGAGTGG GTCGACGCCG CGGAGCTGGC GGTCAGCGAG
CTGGTCACCA ACGCGGCCCT GCACGCGCGC ACCGACGTCG AGGTCGACGT CGAGGTGCAC
CCGGAGCACG TGCGGGTCGA GGTGCGCGAC TCCAACCCCT CCCTCCCCTC CCAGCGCCAC
TACGGCGAGC AGGCCACGAC CGGGCGCGGG ATGGCGCTCG TGGCCTCGGT GAGCGCCGAC
TGCGGCGTCA CCGCCCTGCC CGACGGCAAG GTCGTGTGGT TCGAGGTGCG GGGGCAGCAG
GAGGACCCCT CCGAGGAGGA CCTGCTCGCG GCCTGGGACG AGGAGCAGTG GGAGGTGCCC
GGGGCGGCCG GGGCTCCCGG TGCCGGGACC GCCCCGCCCG CCGCGCTGTC CACGGTGCGG
CTGCTGGGGG TCCCGCCGAC GCTGTGGGCG GCCACCCGGC AGCACCACGA CGCCGTGCTG
CGCGAGCTGG GGCTCTACCT GACCACCCAC GACGGGGTCA CCGCCGACCT GGCCGCCGTC
GAGGTGGCCC GCCAGTCCTT CTCCAACGCG CTCATCGCCG CGGCGGAGGA CGCCCGCCGC
CGCACCCCGG TCACCTCGAT CCCCTCGACG GGGCTGCCGA CGGCGCTGGA ACCGATCGAC
GTGGAGCTGG ACCTGCCTGC GGAGGTCGGC CCGGCGGCGG CGGCGCTGCA GGACGCCCTC
GACACCGCCG AGCGGCTCGC CGCCCGGGGG GAGCTGCTGG CCCTGCCCGG GCAGGCGGAG
GTCGTCGCGG TGCGCGACTG GGTGTGCGAC CAGGTCCGGA GCCAGTTGCG GGGCGGGGCC
CCCTGGCCGT GGCAGGGGGC GCGGGACGAG CGGTTCGAGA CCCCGGCGCC GGGCACCGGC
CCCGCCGCCG TCCCCGACGA GGCGCTCACC GCCGTGCTGG ACGAGGCGGC CCGCCGCGGC
CGGGGCCTGG TGGCCGTCGA CGCCGGCAGC CGGGTCCTGG CCGTCAGCGC GGGGCTGGCC
GCGGCGCTGG GCTGGGCGGT GGACGACCTC GTGGGCCGCC GGGTCGTGGC CATCATCCCG
CCGGCGCTGC GCGAGGCCCA CATCGCCGGG TTCAGCCGCC ACCTGCACAC CGGGGAGTCC
CGCGTCCTGG GCAAGCCGCT GGTCCTGCCG GTGCTGCACG CCGACGGCCG GGAGGTCACC
TGCGGGTTGC TCATCGAGCG CCGGCCCACG CCGGCGGGGC GGTGGCTGTA CCTGGCCTGG
ATCGACCCCC CCGGCGACGC GGACCCGGCC TGA
|
|---|
| Protein sequence | MSSPPAPPGP TGASPARSGR RVLLPPDSGA PRRARRLVRE VLEGAGREEW VDAAELAVSE
LVTNAALHAR TDVEVDVEVH PEHVRVEVRD SNPSLPSQRH YGEQATTGRG MALVASVSAD
CGVTALPDGK VVWFEVRGQQ EDPSEEDLLA AWDEEQWEVP GAAGAPGAGT APPAALSTVR
LLGVPPTLWA ATRQHHDAVL RELGLYLTTH DGVTADLAAV EVARQSFSNA LIAAAEDARR
RTPVTSIPST GLPTALEPID VELDLPAEVG PAAAALQDAL DTAERLAARG ELLALPGQAE
VVAVRDWVCD QVRSQLRGGA PWPWQGARDE RFETPAPGTG PAAVPDEALT AVLDEAARRG
RGLVAVDAGS RVLAVSAGLA AALGWAVDDL VGRRVVAIIP PALREAHIAG FSRHLHTGES
RVLGKPLVLP VLHADGREVT CGLLIERRPT PAGRWLYLAW IDPPGDADPA
|
|---|
| |