Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_0108 |
Symbol | |
ID | 5337180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 2210438 |
End bp | 2211346 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | methylisocitrate lyase |
Protein accession | YP_001359863 |
Protein GI | 152964079 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0279515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0353052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGAACT CGTCGACGAC GCCGAGCGCC AAGCGCACCG CCCTGCGGGA GGCCCTGCGC GGCAGCGAGC TGCTGCGGTT CCCCGGGGCC TTCAACCCGC TCTCCGCGAA GCTCGTGCAG CGGCACGGGT TCGAGGGGGT CTACGTCTCC GGGGCGGTGC TGTCGGCCGA CCTCGGGCTG CCCGACATCG GGCTGACCAC CCTCACCGAG GTCGCCGCCC GCTCCGCGCA GATCGCCCGG GTCACCGACC TGCCCGTCCT CGTCGACGCC GACACCGGTT TCGGGGAACC CCTCAACCTC GCCCGCACCG TGCAGACCCT GGAGGACGCC GGGGTCGCCG GCCTGCACGT CGAGGACCAG GTGAACCCCA AGCGGTGCGG GCACCTGGAG GGCAAGTCCG TCGTCGACGA GGCGACCGCG GTGCGCCGGG TGAAGGCCGC CGTCGACGCC CGCCGCGACC CCGACTTCCT CGTCGTGGCC CGCACCGACG TGCGCGGGGT CGAGGGTCTC GACGCCGCGG TGCGCCGGGC GAAGGCCCTC GTCGACGCCG GCGCCGACGC GGTGTTCGCC GAGGCCATGG CCGACCTCGC CGAGTTCGAG GCGATCTGCT CCGCCCTCGA CGTGCCGGTG CTCGCGAACA TGACCGAGTT CGGGCGCAGC GACCTGTTCA CCCACGACCA GCTGCGCGAC GCCGGGGTCC GCATCGTCAT CCACCCCGTG TCGCTGCTGC GGCTGGCGAT GGGGGCCGCC GACCGGGCCC TGGCGGAACT CTCGGGGACG GGGACCCTCG CCGCGCAGGT CCCGCGGATG CAGACCCGGG CCGAGCTGTA CGACCTCGTC GACTACGCCG GCTACGGCGA CTTCGACTCC GGCGTCTTCG ACTTCAGCCT GGAGGGGAAC CGGTCGTGA
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Protein sequence | MLNSSTTPSA KRTALREALR GSELLRFPGA FNPLSAKLVQ RHGFEGVYVS GAVLSADLGL PDIGLTTLTE VAARSAQIAR VTDLPVLVDA DTGFGEPLNL ARTVQTLEDA GVAGLHVEDQ VNPKRCGHLE GKSVVDEATA VRRVKAAVDA RRDPDFLVVA RTDVRGVEGL DAAVRRAKAL VDAGADAVFA EAMADLAEFE AICSALDVPV LANMTEFGRS DLFTHDQLRD AGVRIVIHPV SLLRLAMGAA DRALAELSGT GTLAAQVPRM QTRAELYDLV DYAGYGDFDS GVFDFSLEGN RS
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