| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_0080 |
|---|
| Symbol | |
|---|
| ID | 5334685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 2237791 |
|---|
| End bp | 2238282 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_001359835 |
|---|
| Protein GI | 152964051 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.400296 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.226729 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAACTGA ACTACGAGGA GTTCGTCGCC GCCCGCGGAC CGGCGCTGCA GCGCCTGGCC
CGCGGGCTGC TGCGCAACCC CTCCGACGCC GAGGACGTCG TGCAGGACGT CCTGGCCAAG
GCCCTGCTGA AGTGGAACCG CATCAGCGCC GCCGACGACC CCATCGCCTA CGTCAACCGC
ATGCTGGTCA ACGAGTCCAC CTCCTTCTGG CGCCGCACCG CGCGCCGGGA GGACCCCCGC
GCGCCGGAGG ACCTCCCCGT CTCCGCCGCC GCGGACGCCA CCCAGCGCTT CCTCGACCGC
GACGCGCTGC TCGCCGCGGT GCGCACGCTG CCGACCAAGC AGCGCTCGGT GGTCGCCCTG
CGCTACCTCG ACGAGATGGA CGACGAGCGC ATCGCCGACA TCCTCGACAT GACCACCGGT
GCGGTGCGCG TCAACGCCAG CCGCGGGCTG GCGACCCTGC GCGCGGCCAT GAAGCTCCCC
GCCACCGTCT GA
|
|---|
| Protein sequence | MELNYEEFVA ARGPALQRLA RGLLRNPSDA EDVVQDVLAK ALLKWNRISA ADDPIAYVNR
MLVNESTSFW RRTARREDPR APEDLPVSAA ADATQRFLDR DALLAAVRTL PTKQRSVVAL
RYLDEMDDER IADILDMTTG AVRVNASRGL ATLRAAMKLP ATV
|
|---|
| |