| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_6368 |
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| Symbol | trmE |
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| ID | 5356597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 6584325 |
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| End bp | 6585692 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640815412 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001351679 |
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| Protein GI | 152988592 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCCG CTACCGAAAC CATCGCCGCC ATCGCTACCG CCCCGGGCCG GGGTGGCGTG
GGTATCGTCC GGGTCTCCGG GCCGCTGGCC GGGCGGATCG CCGTCGAAGT CAGCGGCCGC
GAATTGAAGC CCCGGCACGC ACACTACGGC CCGTTCCTCG ATGGCGGCGG ACAGGTGATC
GACGAAGGCC TGTCGCTGTA TTTCCCCGGG CCTAACTCCT TCACCGGCGA AGACGTGCTC
GAACTGCAGG GCCACGGTGG CCCGGTGGTG CTCGACCTGC TGGTGCAGCG TTGTCTGGAA
CTGGGCGCCC GCCAGGCGCG ACCGGGCGAA TTCAGCGAGC GCGCCTTCCT CAACGACAAG
CTGGACCTGG CCCAGGCCGA GGCCATCGCC GACCTGATCG AAGCCAGCTC GGAGCAAGCC
GCGCGCAACG CCCTGCGATC TTTGCAGGGC GAGTTCTCGC GGCGGGTGCA TGCGCTGACC
GAGCAACTGA TCTCCCTGCG CATCTATGTC GAAGCCGCCA TCGACTTCCC CGAGGAGGAA
ATCGACTTCC TCGCCGATGG CCATGTACTG GGGCTTCTGG AAAAAGTACG CACAGAATTA
TCCACAGTTC GGCGCGAAGC TTCCCAGGGC GCCTTGCTAC GCGACGGCAT GACCGTGGTC
ATCGCCGGCC GCCCGAACGC CGGCAAGTCC AGCCTGCTGA ATGCCCTGGC CGGTCGCGAG
GCGGCCATCG TCACCGACAT CGCCGGCACC ACCCGGGATG TACTGCGTGA ACATATCCAC
ATCGATGGCA TGCCCCTGCA TGTAGTGGAC ACCGCGGGCC TGCGCGATAC CGAGGATCAT
GTGGAAAAGA TCGGCGTGGA ACGTGCGCTG AAAGCCATCG GCGAAGCCGA TCGCGTGCTG
CTGGTGGTGG ACGCCACCGC CCCGGAAGCA GCGGACCCTT TTTCCCTATG GCCGGAGTTC
CTCGACCAGC GCCCGGAACC GGGCAAGGTT ACCCTGATCC GCAACAAAGC GGATTTGTCC
ACAGAGGCCA TCGGTCTCGA GGAAAGCGCC GATGGCCATG TGACCATAAC CCTGTCGGCG
CGGACCAACG CCGGCCTGGA ACTGCTGCGC GAGCACCTGA AGGCCTGCAT GGGCTTCGAA
CAGACCGCGG AAAGCGGCTT CAGCGCACGC CGCCGCCACC TGGAAGCGCT GCGCCTGGCC
GGAAACGCAC TGGAACATGG TCACGCGCAA CTTATCCACA ACGGGGCTGG CGAGTTGCTC
GCCGAAGATT TGCGCCAGGC GCAGCAGCAC CTCGGCGAAA TTACCGGGGC CTTCACTCCC
GACGATCTGC TGGGACGGAT CTTCTCGAGT TTCTGTATCG GCAAATGA
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| Protein sequence | MQAATETIAA IATAPGRGGV GIVRVSGPLA GRIAVEVSGR ELKPRHAHYG PFLDGGGQVI
DEGLSLYFPG PNSFTGEDVL ELQGHGGPVV LDLLVQRCLE LGARQARPGE FSERAFLNDK
LDLAQAEAIA DLIEASSEQA ARNALRSLQG EFSRRVHALT EQLISLRIYV EAAIDFPEEE
IDFLADGHVL GLLEKVRTEL STVRREASQG ALLRDGMTVV IAGRPNAGKS SLLNALAGRE
AAIVTDIAGT TRDVLREHIH IDGMPLHVVD TAGLRDTEDH VEKIGVERAL KAIGEADRVL
LVVDATAPEA ADPFSLWPEF LDQRPEPGKV TLIRNKADLS TEAIGLEESA DGHVTITLSA
RTNAGLELLR EHLKACMGFE QTAESGFSAR RRHLEALRLA GNALEHGHAQ LIHNGAGELL
AEDLRQAQQH LGEITGAFTP DDLLGRIFSS FCIGK
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