Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_6347 |
Symbol | |
ID | 5354924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 6563857 |
End bp | 6564816 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640815391 |
Product | hypothetical protein |
Protein accession | YP_001351658 |
Protein GI | 152985874 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.884307 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCTGA GCAGACGCCT CGGTCTTTTC ACGCTCGCCG CAACGGTAAC CTTCAGCACT GCGGTCTTCG CCGCGCCGAC CTTCATCAAT ATCCTCACCG GCGGCACCAG CGGGGTCTAC TACCCCATCG GGGTCGGCCT CTCGCAGATC TACGGGCACG ACATCCCGGG CGCCAAGACT TCGGTGCAGG CCACCAAGGC CTCGGTCGAG AACCTCAACC TGTTGCAGGC AGGTCGCGGC GAGCTGGCGC TGGCGCTGGG CGATTCGGTC GCCGACGCCT GGAACGGGGT GGCCGACGCC GGCTTCAAGG CGCCGCTGAA GAAGCTGCGG GCGATCGGCA ATACCTACCC CAACTATATC CAGGTGGTCG CCAGCCAGGC CTCGGGGATC AAGACCCTGG CCGACCTGAA AGGCAAGCGC ATCTCGGTGG GCGCACCCAA GAGCGGCACC GAGCTGAACG CCCGGGCGAT CTTCAAGGCC GCCGGTCTGA GCTACGAGGA CATGGGCAAG GTGGAATACC TCCCGTACGC CGAATCGGTG GAGCTGATCA AGAACCGCCA GCTCGACGCC ACCCTGCAAT CCTCCGGTCT GGGCATGGCC GCCATCCGCG ACCTTGCCTC GACCATGCCG ATCACCTTCG TCGCGATTCC GGCGGAGGTG GTGGCGAAGA TCGACAGTCC GGCCTATCAC GCCGCGAGCA TTCCCGCCGG TACCTACGAC GGCCAGGAGC AGGACGTGCC GACGGTGGCC ATCGACAACA TCCTGGTCAG CCACGCCGGG GTCAGCGACG AGCTGGCCTA CCAGATGACC AGGCTGATGT TCGACAACCT GCCGCGGCTG GTCACCGCCC ATGCCGCGGC CAAGGACATC GCCCTGGACA AGGCGGCGAA GAACCTGCCG ATACCGCTGC ACCCCGGCGC CGAGCGCTTC TACAAGGAAA AGGGCGTCCT GCCGCAGTGA
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Protein sequence | MSLSRRLGLF TLAATVTFST AVFAAPTFIN ILTGGTSGVY YPIGVGLSQI YGHDIPGAKT SVQATKASVE NLNLLQAGRG ELALALGDSV ADAWNGVADA GFKAPLKKLR AIGNTYPNYI QVVASQASGI KTLADLKGKR ISVGAPKSGT ELNARAIFKA AGLSYEDMGK VEYLPYAESV ELIKNRQLDA TLQSSGLGMA AIRDLASTMP ITFVAIPAEV VAKIDSPAYH AASIPAGTYD GQEQDVPTVA IDNILVSHAG VSDELAYQMT RLMFDNLPRL VTAHAAAKDI ALDKAAKNLP IPLHPGAERF YKEKGVLPQ
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