Gene PSPA7_6347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_6347 
Symbol 
ID5354924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp6563857 
End bp6564816 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content66% 
IMG OID640815391 
Producthypothetical protein 
Protein accessionYP_001351658 
Protein GI152985874 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID[TIGR02122] TRAP transporter solute receptor, TAXI family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.884307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTGA GCAGACGCCT CGGTCTTTTC ACGCTCGCCG CAACGGTAAC CTTCAGCACT 
GCGGTCTTCG CCGCGCCGAC CTTCATCAAT ATCCTCACCG GCGGCACCAG CGGGGTCTAC
TACCCCATCG GGGTCGGCCT CTCGCAGATC TACGGGCACG ACATCCCGGG CGCCAAGACT
TCGGTGCAGG CCACCAAGGC CTCGGTCGAG AACCTCAACC TGTTGCAGGC AGGTCGCGGC
GAGCTGGCGC TGGCGCTGGG CGATTCGGTC GCCGACGCCT GGAACGGGGT GGCCGACGCC
GGCTTCAAGG CGCCGCTGAA GAAGCTGCGG GCGATCGGCA ATACCTACCC CAACTATATC
CAGGTGGTCG CCAGCCAGGC CTCGGGGATC AAGACCCTGG CCGACCTGAA AGGCAAGCGC
ATCTCGGTGG GCGCACCCAA GAGCGGCACC GAGCTGAACG CCCGGGCGAT CTTCAAGGCC
GCCGGTCTGA GCTACGAGGA CATGGGCAAG GTGGAATACC TCCCGTACGC CGAATCGGTG
GAGCTGATCA AGAACCGCCA GCTCGACGCC ACCCTGCAAT CCTCCGGTCT GGGCATGGCC
GCCATCCGCG ACCTTGCCTC GACCATGCCG ATCACCTTCG TCGCGATTCC GGCGGAGGTG
GTGGCGAAGA TCGACAGTCC GGCCTATCAC GCCGCGAGCA TTCCCGCCGG TACCTACGAC
GGCCAGGAGC AGGACGTGCC GACGGTGGCC ATCGACAACA TCCTGGTCAG CCACGCCGGG
GTCAGCGACG AGCTGGCCTA CCAGATGACC AGGCTGATGT TCGACAACCT GCCGCGGCTG
GTCACCGCCC ATGCCGCGGC CAAGGACATC GCCCTGGACA AGGCGGCGAA GAACCTGCCG
ATACCGCTGC ACCCCGGCGC CGAGCGCTTC TACAAGGAAA AGGGCGTCCT GCCGCAGTGA
 
Protein sequence
MSLSRRLGLF TLAATVTFST AVFAAPTFIN ILTGGTSGVY YPIGVGLSQI YGHDIPGAKT 
SVQATKASVE NLNLLQAGRG ELALALGDSV ADAWNGVADA GFKAPLKKLR AIGNTYPNYI
QVVASQASGI KTLADLKGKR ISVGAPKSGT ELNARAIFKA AGLSYEDMGK VEYLPYAESV
ELIKNRQLDA TLQSSGLGMA AIRDLASTMP ITFVAIPAEV VAKIDSPAYH AASIPAGTYD
GQEQDVPTVA IDNILVSHAG VSDELAYQMT RLMFDNLPRL VTAHAAAKDI ALDKAAKNLP
IPLHPGAERF YKEKGVLPQ