| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_6316 |
|---|
| Symbol | |
|---|
| ID | 5359767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 6533247 |
|---|
| End bp | 6534035 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640815360 |
|---|
| Product | beta-lactamase PSE-2 |
|---|
| Protein accession | YP_001351627 |
|---|
| Protein GI | 152984072 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2602] Beta-lactamase class D |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTTC TCTTCTTCAG CGCCCTTCTC CTGCTCTTCG GACAGGCCCA GGCCAGCGAA
TGGAACGACA GCCAGGCAGT GGGCAAGCTA TTCGAAGCCG CCGGGATGAA AGGTACCTTC
GTTCTCTACG ACGTGCAGCG GCAGGGTTAT GACGGCCACG ACCGAGCACG CGCGCAGACC
CGCTTCGTCC CTGCCTCCAC CTATAAGGTG GCGCACAGCC TGATCGGTTT ATCCACAGGC
GCGGTGAAGT CCGCCGACGA GGTCCTGCCC TATGGCGGCA AGCCCCAGCG CTTCAAGGCC
TGGGAGCATG ACATGAGCCT GCGCGAGGCG ATCCGTGCAT CCAACGTGCC GGTCTACCAG
GAACTGGCGC GGCGCATCGG CCTGCAGCGT ATGCGCGCCA ACCTCGCCCG CATGGACTAT
GGAAATGGCG AGGTCGGGCA GGTTGTGGAC AACTTCTGGC TGGTGGGGCC ACTGGAGATC
AGCGCGCTGG AGCAGACCCG TTTCCTCGCC CGGCTGGCAC AGGGAGAACT GCCGTTTCCC
GAGCAGGTGC AGGCCACCGT GCGCGACATG ACCCTGATGG AACACGGCCC GGACTGGGAG
CTGCACGGCA AGACCGGCTG GTGTTTCGAT TGCACGCCGG AACTCGGCTG GTGGGTCGGC
TGGGTGAAGC GCGACGAGCG CCTTTACACC TTCGCCCTGA ACATCGACAT GCCCGGCGGC
GAGGCCGACA TCGGCAAGCG CCTCGAACTG GGCAAGGCCG CTCTCAAGGC CTTGGGCGTG
CTGCCCTAG
|
|---|
| Protein sequence | MRLLFFSALL LLFGQAQASE WNDSQAVGKL FEAAGMKGTF VLYDVQRQGY DGHDRARAQT
RFVPASTYKV AHSLIGLSTG AVKSADEVLP YGGKPQRFKA WEHDMSLREA IRASNVPVYQ
ELARRIGLQR MRANLARMDY GNGEVGQVVD NFWLVGPLEI SALEQTRFLA RLAQGELPFP
EQVQATVRDM TLMEHGPDWE LHGKTGWCFD CTPELGWWVG WVKRDERLYT FALNIDMPGG
EADIGKRLEL GKAALKALGV LP
|
|---|
| |