Gene PSPA7_6240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_6240 
Symbolwzt 
ID5359627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp6453489 
End bp6454754 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content67% 
IMG OID640815284 
ProductABC subunit of A-band LPS efflux transporter 
Protein accessionYP_001351551 
Protein GI152988140 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACAGA TACGCGTATC CGGCCTGGGC AAGGCCTACA AGCAATATCC CAATCGCTGG 
AGCCGGCTGT TCGAGTGGCT GGTGCCTTTC AGCCCTTCGC GCCACCACCT GCACTGGATC
CTGCGCGACG TCGAGTTCAC CATCGAGCCT GGCGAAGCGG TCGGCATCGT CGGGGTCAAT
GGCGCTGGCA AGAGCACCCT GCTGAAGATG ATCGCCGGCA CCACCCAGCC GACCTGCGGC
GAGATCCGCG TGGCCGGCCG GGTCGCCGCG CTGCTCGAAT TGGGCATGGG CTTCCACCCG
GACTTCACCG GCCGGCAGAA CGTCTTCATG GCCGGGCAAC TGCTGGGCAT GCAGGTCGAG
GAGATCCAGG CGCTGATGCC GGAGATCGAG GCCTTCGCCG AGATCGGCGA GGCCATCGAG
CAGCCGGTGC GCACCTACTC CAGCGGCATG CAGATGCGCC TGGCGTTCAG CGTGGCGACT
GCCCGGCGAC CGGACATCCT GATCGTCGAC GAGGCCCTGT CGGTTGGCGA TGCCTATTTC
CAGCACAAGA GCTTCGAGCG CATCCGCAGC TTCCGCAAGG CCGGCACCAC CCTGCTGATC
GTTTCCCACG ACCGCTCGGC GATCCAGTCC ATCTGCGACT CCGCGATTCT CCTGGAGCAG
GGACGGATGG CCATGCGTGG GCGGCCGGAG GAGGTGATGG ACTACTACAA CGCCCTGCTC
GCCGAGCGCG AGGGGCAGAC CGTGCGCCAG GAAATGCTCG CCGACGGCCA GGTGCGGACG
ATCTCCGGTA CCGGTGAGGC GGCGATCCTC GACGTGCGGA TGGTCGACCA GCGGCAGCGC
GCGCTGGAGG TGGTCGAGGT GGGCCAGCCG GTGGCGCTGG AGGTCGAGGT GGAGGTACGC
CAGGACATCG AGCGGCTGAT CCTCGGCTTC ATGATCAAGG ACCGCCTCGG CCAGCCGATG
TACGGGATCA ATACCCACCG CCTGGACAAG GCCCTCACCG ACCTGAAGGC CGGCGAGCGC
ATCACCTACC GCTTCGCCTT CGACATGCGC CTGGGCAAGG GTCACTATTC GGTGGCGCTG
AGCCTGTCGC GGCTGGACTC GCACCTGGAC CGCAACTTCG AATGGCGCGA CTACGGCCTG
GTCTTCCATG TCATCAACAA CCGCCGGGAA GACTTCGTCG GTTGCTCCTG GCTGGGCGCC
GAAACCCATG TCAGCCGCTC CACCGAGGCG GCGCTGGACC CCACCTCCGC GGAGAGCACT
CCATGA
 
Protein sequence
MGQIRVSGLG KAYKQYPNRW SRLFEWLVPF SPSRHHLHWI LRDVEFTIEP GEAVGIVGVN 
GAGKSTLLKM IAGTTQPTCG EIRVAGRVAA LLELGMGFHP DFTGRQNVFM AGQLLGMQVE
EIQALMPEIE AFAEIGEAIE QPVRTYSSGM QMRLAFSVAT ARRPDILIVD EALSVGDAYF
QHKSFERIRS FRKAGTTLLI VSHDRSAIQS ICDSAILLEQ GRMAMRGRPE EVMDYYNALL
AEREGQTVRQ EMLADGQVRT ISGTGEAAIL DVRMVDQRQR ALEVVEVGQP VALEVEVEVR
QDIERLILGF MIKDRLGQPM YGINTHRLDK ALTDLKAGER ITYRFAFDMR LGKGHYSVAL
SLSRLDSHLD RNFEWRDYGL VFHVINNRRE DFVGCSWLGA ETHVSRSTEA ALDPTSAEST
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