Gene PSPA7_6021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_6021 
SymboldapF 
ID5354157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp6217148 
End bp6217978 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content66% 
IMG OID640815065 
Productdiaminopimelate epimerase 
Protein accessionYP_001351337 
Protein GI152986770 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0253] Diaminopimelate epimerase 
TIGRFAM ID[TIGR00652] diaminopimelate epimerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.449975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTTGC GCTTCACCAA GATGCATGGG CTGGGCAATG ACTTCATGGT CCTCGACCTG 
GTCAGCCAGC ACGCCCATGT GCAACCCAAG CACGTCAAGC TCTGGGGCGA CCGCAACACC
GGGGTCGGCT TCGACCAGTT GCTGATCGTC GAAGCCCCGA GCAGCCCCGA CGTCGACTTC
CGCTACCGCA TCTTCAATGC CGACGGCTCC GAAGTGGAAC AGTGCGGCAA CGGCGCGCGC
TGCTTCGCCC GTTTCGTCCA GGACAAGCGC CTGACGGTGA AGAAGAGCAT CCGCGTAGAA
ACCAAGGGCG GCATCATCGA GCTGAATATC CGCCCGGACG GCCAGGTCAC GGTGGACATG
GGTCCGCCGC GCCTGGCCCC GGCCGAGATA CCGTTCCAGG CCGAGCGCGA AGCCTTGTCC
TATGAGATAG AGGTGAATGG CCAGCGCGTC GAACTGGCCG CGGTATCCAT GGGCAATCCC
CATGGCGTGC TGCGCGTCGA GAATGTCGAC AGCGCACCGG TACACAGCCT CGGTCCGCAA
CTGGAAGTCC ATCCGCGCTT CCCGAAGAAG GCCAACATCG GCTTCCTCCA GGTGCTCGAT
CCGCACCATG CGCGCCTGCG CGTCTGGGAA CGCGGCGTCG GCGAGACCCA GGCCTGCGGC
ACCGGCGCCT GCGCCGCGGC GGTCGCCGGG ATCCGCCAGG GCTGGCTGCA ATCGCCGGTA
CAGATCGATC TCCCCGGGGG ACGCCTGCAC ATCGAGTGGG CAGGCCCCGG CCAGCCCGTT
ATGATGACCG GACCCGCCGT CCGCGTGTAC GAAGGCCAGG TCCGCCTGTA A
 
Protein sequence
MLLRFTKMHG LGNDFMVLDL VSQHAHVQPK HVKLWGDRNT GVGFDQLLIV EAPSSPDVDF 
RYRIFNADGS EVEQCGNGAR CFARFVQDKR LTVKKSIRVE TKGGIIELNI RPDGQVTVDM
GPPRLAPAEI PFQAEREALS YEIEVNGQRV ELAAVSMGNP HGVLRVENVD SAPVHSLGPQ
LEVHPRFPKK ANIGFLQVLD PHHARLRVWE RGVGETQACG TGACAAAVAG IRQGWLQSPV
QIDLPGGRLH IEWAGPGQPV MMTGPAVRVY EGQVRL