| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5990 |
|---|
| Symbol | |
|---|
| ID | 5359352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 6188735 |
|---|
| End bp | 6189403 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640815034 |
|---|
| Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
|---|
| Protein accession | YP_001351306 |
|---|
| Protein GI | 152983637 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATAAGA AAGTTGCCGT CATCCTCTCC GGTTGTGGCG TCTACGATGG CACGGAAATC
CACGAGAGCG TGATCACCCT GCTCCGCCTC AGCCAGCGCG GCGCCGAGGT GCAGTGCTTC
GCGCCGAACA TCGCCCAGCA CCACGTGATC AACCACCTGA CCGGCGAGGA AATGCCGGAA
AGCCGCAACG TCTTGGTCGA GTCGGCGCGC ATCGCCCGCG GCGAGATCAA GGACCTGCGC
GAAGCCCGCG CCGAGGATTT CGACGCGCTG ATCGTGCCCG GCGGCTTCGG CGCGGCGAAG
AATCTCAGCG ATTTCGCCAT CGCCGGCGCG CAATGCCAGG TGCAGCCGGA CGTGCTGGCC
CTGGCCAGGG GCTTCGTCGA CGCCGGCAAG CCGGTGGGCC TGATCTGCAT CGCCCCGGCA
ATGGCGGCGA AGATCTACGG CGCCGGGGTG CAATGCACCA TCGGCAACGA TGCCGGCACC
GCCGAGGCGC TGAAGCAGAT GGGCGCCGAG CACCTCGACG CGCCGGTCGA CGAGATCGTC
GAGGACGCCG CGCGCAAGCT GGTGAGCACA CCGGCCTACA TGCTCGCGCA GTCGATCGCC
GAGGCGGCCT CCGGCATCAA CAAGCTGGTC GACCGGGTAC TCGAACTGGT GGATCAGGGC
AAGGCCTGA
|
|---|
| Protein sequence | MHKKVAVILS GCGVYDGTEI HESVITLLRL SQRGAEVQCF APNIAQHHVI NHLTGEEMPE
SRNVLVESAR IARGEIKDLR EARAEDFDAL IVPGGFGAAK NLSDFAIAGA QCQVQPDVLA
LARGFVDAGK PVGLICIAPA MAAKIYGAGV QCTIGNDAGT AEALKQMGAE HLDAPVDEIV
EDAARKLVST PAYMLAQSIA EAASGINKLV DRVLELVDQG KA
|
|---|
| |