| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5980 |
|---|
| Symbol | |
|---|
| ID | 5354385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 6177368 |
|---|
| End bp | 6178834 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640815024 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001351296 |
|---|
| Protein GI | 152989050 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
|---|
| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.467424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTCA AGGATCTCCG CGATTTCATC GCCCAGCTGG AGCAGCGCGG TGCGCTGAAG
CGCATCCAGG TGCCGATTTC CCCCGTGCTC GAGATGACCG AGGTGTGCGA CCGCACGTTG
CGCGCCAAGG GCCCGGCATT GCTGTTCGAG AAACCGACAG GCTTCGACAT GCCGGTGCTC
GGCAACCTGT TCGGCACGCC GGAACGGGTG GCGCTGGGCA TGGGCGCCGA GGATGTCGGC
GCGCTGCGCG AGATCGGCAC GCTGCTGGCG CAGCTCAAGG AACCCGAGCC GCCAAAGGGG
TTCAAGGATG CCTGGGCCAA GCTGCCGATG TACCGCAAGG TCCTGTCCAT GGCGCCGAAG
GTGCTGAAGG ACGCGCCCTG CCAGGAAGTG GTCGAGGAGG GCGACGATGT CGACCTCGGC
CGGCTGCCGG TGCAGACCTG CTGGCCGGGC GATGTCGGGC CGCTGATCAC CTGGGGCCTG
ACCGTCACCC GCGGGCCGAA CAAGGAGCGG CAGAACCTGG GCATCTACCG CCAGCAGGTG
ATCGGTCGCA ACAAGGTGAT CATGCGCTGG CTCAGCCATC GCGGCGGAGC GCTGGACTAT
CGCGAGTGGT GCCAGAAGCA TCCGGGCCAG CCGTATCCGG TCGCCGTGGC GCTGGGTGCC
GATCCGGCGA CCATCCTCGG CGCGGTGACG CCGGTGCCCG ACACCCTTTC CGAATACGCC
TTCGCCGGCC TGTTGCGCGG GCACCGTACC GAACTGGTCA AGTGCCGCGG CAGCGACCTA
CAGGTGCCGG CCAGCGCCGA GATCGTCCTC GAAGGGGTGA TCCACCCCGG CGAGATGGCC
GACGAGGGTC CCTATGGCGA CCATACCGGC TACTACAACG AGGTCGATCG CTTCCCGGTG
TTCACCGTCG AGCGCGTCAC CCGCCGGCAG AAACCGATCT ACCACAGCAC CTACACCGGG
CGTCCGCCGG ACGAGCCGGC GATCCTCGGG GTGGCGCTGA ACGAAGTGTT CGTGCCGATC
CTGCAGAAGC AGTTCCCGGA AATCGTCGAT TTCTACCTGC CGCCCGAAGG TTGTTCCTAC
CGGATGGCCG TGGTGACCAT GAAGAAGCAG TATCCGGGCC ACGCCAAGCG GGTGATGCTC
GGCGTCTGGT CGTTCCTGCG GCAGTTCATG TACACCAAGT TCGTCATCGT CACCGACGAC
GACATCGACG CGCGCGACTG GAACGACGTG ATCTGGGCCA TTACCACGCG GATGGACCCC
AAGCGCGACA CGGTGATGAT CGACAACACG CCTATCGACT ACCTCGATTT CGCCTCGCCG
GTCTCCGGCC TCGGTTCGAA GATGGGACTC GACGCCACCC ACAAGTGGCC GGGCGAGACC
AGCCGCGAGT GGGGTCGCGC CATCGTCAAG GACGAAGCGG TGACCCGGCG TATCGATGAG
CTCTGGTCGA GCCTCGGGAT CGACTGA
|
|---|
| Protein sequence | MTFKDLRDFI AQLEQRGALK RIQVPISPVL EMTEVCDRTL RAKGPALLFE KPTGFDMPVL
GNLFGTPERV ALGMGAEDVG ALREIGTLLA QLKEPEPPKG FKDAWAKLPM YRKVLSMAPK
VLKDAPCQEV VEEGDDVDLG RLPVQTCWPG DVGPLITWGL TVTRGPNKER QNLGIYRQQV
IGRNKVIMRW LSHRGGALDY REWCQKHPGQ PYPVAVALGA DPATILGAVT PVPDTLSEYA
FAGLLRGHRT ELVKCRGSDL QVPASAEIVL EGVIHPGEMA DEGPYGDHTG YYNEVDRFPV
FTVERVTRRQ KPIYHSTYTG RPPDEPAILG VALNEVFVPI LQKQFPEIVD FYLPPEGCSY
RMAVVTMKKQ YPGHAKRVML GVWSFLRQFM YTKFVIVTDD DIDARDWNDV IWAITTRMDP
KRDTVMIDNT PIDYLDFASP VSGLGSKMGL DATHKWPGET SREWGRAIVK DEAVTRRIDE
LWSSLGID
|
|---|
| |