Gene PSPA7_5945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_5945 
Symbol 
ID5357197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp6137568 
End bp6139907 
Gene Length2340 bp 
Protein Length779 aa 
Translation table11 
GC content68% 
IMG OID640814990 
Producthypothetical protein 
Protein accessionYP_001351262 
Protein GI152988034 
COG category[K] Transcription 
COG ID[COG2183] Transcriptional accessory protein 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.961122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGCA TCAACACCCG TATCGCCGAG GAGCTCTCCG CACTGCCCTC CGGCCGCGTT 
CAACCGCAGC AAGTCGCCGC TGCCGTCGCC CTGCTCGACG AGGGCTCCAC CGTTCCCTTC
ATCGCCCGTT ACCGCAAAGA GGTCACCGGC AGCCTCGACG ATACCCAGTT GCGCATGCTG
GAAGAGCGCC TGCGCTACCT GCGCGAACTG GAAGAACGCC GCGCCGCGAT CCTGGCCAGC
ATCGAGGAAC AGGGCAAGCT GACCCCCGAA CTGGCCCGCG ACATCAAGCT CGCCGACACC
AAGACCCGCC TCGAGGACCT CTACCTGCCT TATAAGCAGA AGCGCCGCAC CAAGGGCCAG
ATCGCCCTGG AAGCCGGCCT CGGCGAACTG GCCGACGCAC TGTTCGACGA CCCGACCCTG
GTCCCGGAAA GCGAGGCCGC GCGCTTCGTC GATGCGGAGA AAGGCTTCGC CGATGTCAAG
GCGGTCCTGG AAGGCGCCAA GTACATTCTC ATGGAGCGCT TCGCCGAAGA CGCCGCCCTG
CTCGACAAGC TGCGCGTGTT CATGAAGAAC GAAGCGACCC TGACCGCCCG CGTGGTGCCC
GGCAAGGAAC AGGAAGGCGC CAAGTTCAGC GACTACTTCG AACACGACGA GCCGCTGAAA
AGCGCCCCCT CGCACCGCGC CCTGGCGATC TTCCGCGGAC GCAACGAAGG CGTCCTCAGC
GCCTCGCTGA AGGTCGGCGA GGAAGCGCCG GGCACCCTGC ATCCATGCGA AGTCATGATC
GCCGAGCGCT TCGGCCTGTC CAACCAGGGC CGCGCCGCCG ACAAGTGGCT GGCGGAAGTG
GTGCGCTGGA CCTGGAAGGT CAAGCTCTAC ACCCACCTGG AAACCGACCT GTTCGGCGAA
CTCCGCGACG GCGCCGAGAA CGAGGCGATC AGCGTCTTCG CGCGCAACCT GCATGACCTG
CTGCTGGCCG CCCCGGCCGG CCCGCGCGCC ACCCTCGGCC TGGACCCGGG CCTGCGCACC
GGGGTCAAGG TCGCGGTGGT CGACGCCACC GGCAAGCTGC TGGACACCGC CACCGTCTAC
CCGCATGCGC CGAAGAACCA GTGGGACCAG ACCCTCGCCG TGCTCGCCGC GCTGTGCGCC
AAGCACCAGG TCGAGCTGAT CGCCATCGGC AACGGCACCG CCAGCCGCGA GACCGACAAG
CTGGCCGGCG AACTGATCAA GAAGTATCCG GGCATGAAGC TGACCAAGAT CATGGTCAGC
GAGGCCGGCG CATCGGTGTA TTCCGCCTCC GAACTGGCGG CGAAGGAGTT CCCCGAGTTG
GACGTGTCCC TGCGCGGCGC CGTGTCCATC GCCCGCCGCC TGCAGGACCC GCTGGCGGAG
CTGGTGAAGA TCGAGCCCAA GTCGATCGGT GTCGGCCAGT ACCAGCACGA CGTGTCCCAG
CTGAAGCTGG CGCGTAGCCT GGACGCGGTG GTCGAGGACT GCGTGAACGC CGTCGGCGTC
GACGTCAACA CCGCCTCCGC CGCCCTGCTG GCACGCATCT CCGGCCTCAA CTCGACGCTG
GCGCAGAACA TCGTCGCGCA CCGCGACGCC AACGGCGCGT TCCGCACCCG CGACGAGCTG
AAGAAGGTCA GCCGCCTGGG CGAGAAGACC TTCGAGCAGG CCGCCGGCTT CCTCCGCGTG
ATGAACGGCG ACAACCCGCT GGACGCCTCG GCGGTGCACC CGGAAACCTA CCCGCTGGTG
CAGCGCATCG CCGCCGACAC CGGGCGCGAC ATCCGCTCGC TGATCGGCGA CTCGGCGTTC
CTCAAGCGCC TCGAGCCGAA GAAGTTCACC GACGAGACCT TCGGCCTGCC GACCGTCACC
GACATCCTCA AGGAACTCGA CAAGCCCGGC CGCGACCCGC GTCCGGAGTT CAAGACCGCG
GAGTTCCAGG AAGGCGTCGA GAGCCTCAAG GACCTCAAGC CGGGCATGGT CCTCGAGGGC
GTGGTGACCA ACGTCACCAA CTTCGGCGCG TTCGTCGACA TCGGTGTCCA CCAGGACGGC
CTGGTGCACA TCTCGGCGCT GTCCGAGAAG TTCGTCAAGG ATCCCTACGA GGTGGTCAAG
GCCGGCGACA TCGTCAAGGT CAAGGTCATG GAGGTGGACA TCCCGCGCAA CCGCGTCGGC
CTGTCCATGC GCATGAGCGA CACCCCCGGC GAGAAGGTCG AAGGCCAGCG CGGCGGGCGT
CCCGCCGGCG GCGGCCAGCC ACGCCAGGAG CGTGGCGCTT CGCGCGGGCA GAGCGCACCG
CCGGCGAACA ACGCCATGGC CGCGCTGTTC GCCAACGCCA GGCAACTGAA GAAGAAATGA
 
Protein sequence
MDSINTRIAE ELSALPSGRV QPQQVAAAVA LLDEGSTVPF IARYRKEVTG SLDDTQLRML 
EERLRYLREL EERRAAILAS IEEQGKLTPE LARDIKLADT KTRLEDLYLP YKQKRRTKGQ
IALEAGLGEL ADALFDDPTL VPESEAARFV DAEKGFADVK AVLEGAKYIL MERFAEDAAL
LDKLRVFMKN EATLTARVVP GKEQEGAKFS DYFEHDEPLK SAPSHRALAI FRGRNEGVLS
ASLKVGEEAP GTLHPCEVMI AERFGLSNQG RAADKWLAEV VRWTWKVKLY THLETDLFGE
LRDGAENEAI SVFARNLHDL LLAAPAGPRA TLGLDPGLRT GVKVAVVDAT GKLLDTATVY
PHAPKNQWDQ TLAVLAALCA KHQVELIAIG NGTASRETDK LAGELIKKYP GMKLTKIMVS
EAGASVYSAS ELAAKEFPEL DVSLRGAVSI ARRLQDPLAE LVKIEPKSIG VGQYQHDVSQ
LKLARSLDAV VEDCVNAVGV DVNTASAALL ARISGLNSTL AQNIVAHRDA NGAFRTRDEL
KKVSRLGEKT FEQAAGFLRV MNGDNPLDAS AVHPETYPLV QRIAADTGRD IRSLIGDSAF
LKRLEPKKFT DETFGLPTVT DILKELDKPG RDPRPEFKTA EFQEGVESLK DLKPGMVLEG
VVTNVTNFGA FVDIGVHQDG LVHISALSEK FVKDPYEVVK AGDIVKVKVM EVDIPRNRVG
LSMRMSDTPG EKVEGQRGGR PAGGGQPRQE RGASRGQSAP PANNAMAALF ANARQLKKK