Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5945 |
Symbol | |
ID | 5357197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 6137568 |
End bp | 6139907 |
Gene Length | 2340 bp |
Protein Length | 779 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640814990 |
Product | hypothetical protein |
Protein accession | YP_001351262 |
Protein GI | 152988034 |
COG category | [K] Transcription |
COG ID | [COG2183] Transcriptional accessory protein |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.961122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACAGCA TCAACACCCG TATCGCCGAG GAGCTCTCCG CACTGCCCTC CGGCCGCGTT CAACCGCAGC AAGTCGCCGC TGCCGTCGCC CTGCTCGACG AGGGCTCCAC CGTTCCCTTC ATCGCCCGTT ACCGCAAAGA GGTCACCGGC AGCCTCGACG ATACCCAGTT GCGCATGCTG GAAGAGCGCC TGCGCTACCT GCGCGAACTG GAAGAACGCC GCGCCGCGAT CCTGGCCAGC ATCGAGGAAC AGGGCAAGCT GACCCCCGAA CTGGCCCGCG ACATCAAGCT CGCCGACACC AAGACCCGCC TCGAGGACCT CTACCTGCCT TATAAGCAGA AGCGCCGCAC CAAGGGCCAG ATCGCCCTGG AAGCCGGCCT CGGCGAACTG GCCGACGCAC TGTTCGACGA CCCGACCCTG GTCCCGGAAA GCGAGGCCGC GCGCTTCGTC GATGCGGAGA AAGGCTTCGC CGATGTCAAG GCGGTCCTGG AAGGCGCCAA GTACATTCTC ATGGAGCGCT TCGCCGAAGA CGCCGCCCTG CTCGACAAGC TGCGCGTGTT CATGAAGAAC GAAGCGACCC TGACCGCCCG CGTGGTGCCC GGCAAGGAAC AGGAAGGCGC CAAGTTCAGC GACTACTTCG AACACGACGA GCCGCTGAAA AGCGCCCCCT CGCACCGCGC CCTGGCGATC TTCCGCGGAC GCAACGAAGG CGTCCTCAGC GCCTCGCTGA AGGTCGGCGA GGAAGCGCCG GGCACCCTGC ATCCATGCGA AGTCATGATC GCCGAGCGCT TCGGCCTGTC CAACCAGGGC CGCGCCGCCG ACAAGTGGCT GGCGGAAGTG GTGCGCTGGA CCTGGAAGGT CAAGCTCTAC ACCCACCTGG AAACCGACCT GTTCGGCGAA CTCCGCGACG GCGCCGAGAA CGAGGCGATC AGCGTCTTCG CGCGCAACCT GCATGACCTG CTGCTGGCCG CCCCGGCCGG CCCGCGCGCC ACCCTCGGCC TGGACCCGGG CCTGCGCACC GGGGTCAAGG TCGCGGTGGT CGACGCCACC GGCAAGCTGC TGGACACCGC CACCGTCTAC CCGCATGCGC CGAAGAACCA GTGGGACCAG ACCCTCGCCG TGCTCGCCGC GCTGTGCGCC AAGCACCAGG TCGAGCTGAT CGCCATCGGC AACGGCACCG CCAGCCGCGA GACCGACAAG CTGGCCGGCG AACTGATCAA GAAGTATCCG GGCATGAAGC TGACCAAGAT CATGGTCAGC GAGGCCGGCG CATCGGTGTA TTCCGCCTCC GAACTGGCGG CGAAGGAGTT CCCCGAGTTG GACGTGTCCC TGCGCGGCGC CGTGTCCATC GCCCGCCGCC TGCAGGACCC GCTGGCGGAG CTGGTGAAGA TCGAGCCCAA GTCGATCGGT GTCGGCCAGT ACCAGCACGA CGTGTCCCAG CTGAAGCTGG CGCGTAGCCT GGACGCGGTG GTCGAGGACT GCGTGAACGC CGTCGGCGTC GACGTCAACA CCGCCTCCGC CGCCCTGCTG GCACGCATCT CCGGCCTCAA CTCGACGCTG GCGCAGAACA TCGTCGCGCA CCGCGACGCC AACGGCGCGT TCCGCACCCG CGACGAGCTG AAGAAGGTCA GCCGCCTGGG CGAGAAGACC TTCGAGCAGG CCGCCGGCTT CCTCCGCGTG ATGAACGGCG ACAACCCGCT GGACGCCTCG GCGGTGCACC CGGAAACCTA CCCGCTGGTG CAGCGCATCG CCGCCGACAC CGGGCGCGAC ATCCGCTCGC TGATCGGCGA CTCGGCGTTC CTCAAGCGCC TCGAGCCGAA GAAGTTCACC GACGAGACCT TCGGCCTGCC GACCGTCACC GACATCCTCA AGGAACTCGA CAAGCCCGGC CGCGACCCGC GTCCGGAGTT CAAGACCGCG GAGTTCCAGG AAGGCGTCGA GAGCCTCAAG GACCTCAAGC CGGGCATGGT CCTCGAGGGC GTGGTGACCA ACGTCACCAA CTTCGGCGCG TTCGTCGACA TCGGTGTCCA CCAGGACGGC CTGGTGCACA TCTCGGCGCT GTCCGAGAAG TTCGTCAAGG ATCCCTACGA GGTGGTCAAG GCCGGCGACA TCGTCAAGGT CAAGGTCATG GAGGTGGACA TCCCGCGCAA CCGCGTCGGC CTGTCCATGC GCATGAGCGA CACCCCCGGC GAGAAGGTCG AAGGCCAGCG CGGCGGGCGT CCCGCCGGCG GCGGCCAGCC ACGCCAGGAG CGTGGCGCTT CGCGCGGGCA GAGCGCACCG CCGGCGAACA ACGCCATGGC CGCGCTGTTC GCCAACGCCA GGCAACTGAA GAAGAAATGA
|
Protein sequence | MDSINTRIAE ELSALPSGRV QPQQVAAAVA LLDEGSTVPF IARYRKEVTG SLDDTQLRML EERLRYLREL EERRAAILAS IEEQGKLTPE LARDIKLADT KTRLEDLYLP YKQKRRTKGQ IALEAGLGEL ADALFDDPTL VPESEAARFV DAEKGFADVK AVLEGAKYIL MERFAEDAAL LDKLRVFMKN EATLTARVVP GKEQEGAKFS DYFEHDEPLK SAPSHRALAI FRGRNEGVLS ASLKVGEEAP GTLHPCEVMI AERFGLSNQG RAADKWLAEV VRWTWKVKLY THLETDLFGE LRDGAENEAI SVFARNLHDL LLAAPAGPRA TLGLDPGLRT GVKVAVVDAT GKLLDTATVY PHAPKNQWDQ TLAVLAALCA KHQVELIAIG NGTASRETDK LAGELIKKYP GMKLTKIMVS EAGASVYSAS ELAAKEFPEL DVSLRGAVSI ARRLQDPLAE LVKIEPKSIG VGQYQHDVSQ LKLARSLDAV VEDCVNAVGV DVNTASAALL ARISGLNSTL AQNIVAHRDA NGAFRTRDEL KKVSRLGEKT FEQAAGFLRV MNGDNPLDAS AVHPETYPLV QRIAADTGRD IRSLIGDSAF LKRLEPKKFT DETFGLPTVT DILKELDKPG RDPRPEFKTA EFQEGVESLK DLKPGMVLEG VVTNVTNFGA FVDIGVHQDG LVHISALSEK FVKDPYEVVK AGDIVKVKVM EVDIPRNRVG LSMRMSDTPG EKVEGQRGGR PAGGGQPRQE RGASRGQSAP PANNAMAALF ANARQLKKK
|
| |