Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5897 |
Symbol | |
ID | 5359018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 6089591 |
End bp | 6090793 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640814942 |
Product | multidrug resistance protein |
Protein accession | YP_001351215 |
Protein GI | 152984272 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAGG CACCCACCAT GACGACCGCC AACAGCGAAA CCCCGGCCGG CAACCCGAAG CGCAAGCGCT GGCTGCTGAT CCTGCTCGCC GTGATCATCC TCGGCACCCT GGCCAGCGTG GCCTGGGAAT TCTTCTATGG GCGCTGGCAC GAGGACACCG ACGACGCCTA CATCAACGGC AACGTGGTAC AGATCACGCC GCAGATCGTC GGCACCGTGG TCAGCATCGG CGCCGACGAC GGCGACCTGG TGCGCAAGGG CCAGGAGTTG GTGCGCTTCG ATCCCAGCGA CGCCGACATC GCCCTGCAAC GCGCCGAGGC CAACCTGGCC CATACCGTGC GCCAGGTACG CGGCCTGTTC AGCAACGTCG ACGGCTATCG CGCCGAGGTC GCCACCCGCA AGGTCGCGCT GGCCAAGGCC GAGGCCGACT ACAGGCGGCG CAAGAACCTC GCCGACGACG GCGCCATTTC CCAGGAAGAA CTGGCCCATG CCCGCGACGC CCTGGACAGC GCGAAAGCCT CGCTGACCAG CTCGGAACAG CAGTTGAACA CCAACCGCGC GTTGGTCGAC GACACCCAGA TCACCTCCCA CCCGGACGTC AAGGCCGCCG CCGCGCAACT GCGCCAGGCC TACCTGGACG ATGCCCGCTC GACCATCGTC GCGCCGGTCA CCGGCTACGT CGCCAAGCGC AGCGTGCAGG TCGGCCAGCG CGTGCAACCG GGCAATGCGC TGATGGCGGT GGTCCCGCTG GAGCAGATCT GGATCGACGC CAACTTCAAG GAAACCCAGC TCAAGCACAT GCGTATCGGC CAGCCGGTGG AGATCCGCTC CGACCTCTAC GGCAGCGACG TGCGCTACAG CGGCACCGTC GACAGCCTCG GCGTGGGCAC CGGCAGCGCG TTCTCCCTGC TGCCGGCGCA GAACGCCACC GGCAACTGGA TCAAGATCGT CCAGCGGGTG CCGGTGCGCA TCCATATCGA TCCGGAAGAA TTGCAGAAGC ATCCGCTGCG CATCGGCCTG TCGATGGACG TCAAGGTCGA CCTGCATGAC CAGAGCGGCC CGGCCCTGGC CCAGCAGCCA CCGCGCGAAG CGCTGTTCTC CACCGATGTC TACCAGCAGC AACTGGCCTC CGCCGACAAG CTGATCGAAC GCCTGATCGA AGCCAACCTC GCCGAAGACC ACGGCAAGAC CGCCCAGCGT TGA
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Protein sequence | MNEAPTMTTA NSETPAGNPK RKRWLLILLA VIILGTLASV AWEFFYGRWH EDTDDAYING NVVQITPQIV GTVVSIGADD GDLVRKGQEL VRFDPSDADI ALQRAEANLA HTVRQVRGLF SNVDGYRAEV ATRKVALAKA EADYRRRKNL ADDGAISQEE LAHARDALDS AKASLTSSEQ QLNTNRALVD DTQITSHPDV KAAAAQLRQA YLDDARSTIV APVTGYVAKR SVQVGQRVQP GNALMAVVPL EQIWIDANFK ETQLKHMRIG QPVEIRSDLY GSDVRYSGTV DSLGVGTGSA FSLLPAQNAT GNWIKIVQRV PVRIHIDPEE LQKHPLRIGL SMDVKVDLHD QSGPALAQQP PREALFSTDV YQQQLASADK LIERLIEANL AEDHGKTAQR
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