| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5872 |
|---|
| Symbol | |
|---|
| ID | 5357542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 6068383 |
|---|
| End bp | 6069138 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640814917 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001351191 |
|---|
| Protein GI | 152986070 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAAG TCCTGATCCA GACCCTTATC CTGGGGGTGT TGCTGGGGGC CTCCGCGGCC
CGTGCCGAAT TGCCCGCCGA CTACAAGGTG GTGCTGCTGA CCGAGAACTT CCCGCCCTTC
AACATGGCGG TGGACGACAA GAACTTCGCC CGCGACGACG GCATCGACGG CATCAGTGCC
GACATCGTCC GGGAGATGTT CAGGCGTGCC GGCATCGGCT ATTCCCTGAG CCTGCGCTTC
CCCTGGGACC GCCTGTACCG GTTGACCCTG GACAAGCCCG GCTATGGGCT GTTCTCCATG
ACCTACACCC CCGAGCGGGT GCCGCAGTTC AAGTGGGTCG GTCCGCTGGC CGACACCAGT
TGGGTGTTGC TGGCGCCGGC TGGCAGCAAG ATCGCCGTGA AGAATCTCAA GGACGCCGCC
CGCTACAAGC TCGGCGCCTA CAAGAACGAC GCGGTCAGCC AGCACCTGGA AGCCCAGGGC
ATCCCGGTGA TCAACGCCCT GCGCGACCAG GAGAACGTGA AGAAGCTTAC CGGCGGGCAG
ATCGACCTGT GGGCCACCAC CGATCCGGTC GGTCGCTACC TGGCCAAGCA GGAAGGCGTG
TCCGGCCTGC AGACGGTGCT GCGTTTCAAC GAGGCCAAGC TCTACCTGGC GTTGAACAAG
GACACCCCGG ACGAGGTGGT GGAGCGCCTG CAGAAGGCCC TGGAGCAGAT GCGCCAGGAA
GGCTTCGTCG ACGAAGCCGT CGCCAACTAC CTCTGA
|
|---|
| Protein sequence | MLKVLIQTLI LGVLLGASAA RAELPADYKV VLLTENFPPF NMAVDDKNFA RDDGIDGISA
DIVREMFRRA GIGYSLSLRF PWDRLYRLTL DKPGYGLFSM TYTPERVPQF KWVGPLADTS
WVLLAPAGSK IAVKNLKDAA RYKLGAYKND AVSQHLEAQG IPVINALRDQ ENVKKLTGGQ
IDLWATTDPV GRYLAKQEGV SGLQTVLRFN EAKLYLALNK DTPDEVVERL QKALEQMRQE
GFVDEAVANY L
|
|---|
| |