| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5705 |
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| Symbol | |
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| ID | 5358658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 5873259 |
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| End bp | 5874704 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640814750 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001351024 |
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| Protein GI | 152988240 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCGCA GACTCTCCCT GGCGGCCGCC GTGGCCGCTG CGACCGGTGT CGCCTGGGCC
GCCCAGCCGA CCCCGCTGCC GACCAAGACC GACCTGATCA GCGTCTACAA GGAAGCCGTC
GACAACAACG CCGACCTCGC CGCCGCCCAG GCCGACTACC TGGCGCGCAA GGAAGTGGTG
CCCCAGGCCC GCGCCGGCCT GCTGCCGCAA CTCGGTGCCG GCGGCCGCAT CGGTGACTCG
CGGATCGCTC TCGACGAGCC CGCAGCAACG GTCAAGCGCA GCAGCCATGT AGTCCAGGCC
AGCCTCAGCC AGCCGCTGTT CCGCGCCGAC CGCTGGTTCC AGTGGCAAGC CGCCAAGGAA
ACCAGCGACC AGGCCCGGCT GGAATTCTCC GCGACCCAGC AGGACCTGAT CCTGCGCAGC
GCCGAGACCT ACTTCACGGT GCTCCGCGCC CAGGACAACC TGGCCACCAG CAAGGCCGAG
GAAGCCGCCT TCAAGCGCCA ACTGGACCAG GCCAACGAGC GCTTCGACGT GGGCCTTTCC
GACAAGACCG ACGTGCTCGA GGCCCAGGCC AGCTACGACA CCGCCCGCGC CAACCGGCTG
ATCGCCGAAC AGCGAGTGGA CGATGCCTTC CAGGCCCTGG TGACCCTGAC CAACCGCGAC
TACAGCGCCA TCGAGGGCAT GCGCCACACC CTGCCGGTGG TGCCGCCGGC GCCGAACGAC
GCCAAGGCCT GGGTCGATAC CGCAGTGCAG CAGAACCTGC GCCTGCTGGC CAGCAACTAC
GCGGTCAACG CCGCCGAGGA AACCCTCCGC CAGCGCAAGG CCGGGCACCT GCCGACCCTC
GACGCCGTGG CCCAGTACCA GAAGGGCGAC AACGACGCCC TCGGCTTCGC CAACAGCGCG
GCCAACCCGC TGGTGCACTA CGGCAAGGAT GTCGAGGAGC GTACTATCGG CCTGGAGCTG
AACATCCCGA TCTATACCGG TGGGCTGACT TCCTCCCAGG TCCGCGAGTC CTACCAGCGC
CTCAACCAGA GCGAGCAGTC CCGCGAAGGC CAGCGCCGCC AGGTGGTGCA GGACACCCGC
AACCTGCACC GCGCGGTGAA TACCGACGTC GAGCAGGTCC AGGCGCGGCG CCAGGCGATC
ATCTCCAACC AGAGTTCGCT GGAAGCCACC GAGATCGGCT ACCAGGTCGG CACCCGCAAC
ATCGTCGACG TGCTCAACGC CCAGCGCCAG CTGTACGCCG CCGTGCGCGA CTACAACAAC
AGCCGCTACG ACTACATCCT CGATACCCTG CGCCTGAAGC AGGCGGCCGG CACCCTCAGC
CCGGCCGACC TGGAGGCGCT CAGCGCCTAT CTGAAGCAGG ACTACGATCC GGACAAGGAC
TTCCTCCCGC CAGACCTGGC CAAGGCCGCC GCCGAGCAGT TGCAGGCCCA GCCGCGGGTC
CGCTGA
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| Protein sequence | MLRRLSLAAA VAAATGVAWA AQPTPLPTKT DLISVYKEAV DNNADLAAAQ ADYLARKEVV
PQARAGLLPQ LGAGGRIGDS RIALDEPAAT VKRSSHVVQA SLSQPLFRAD RWFQWQAAKE
TSDQARLEFS ATQQDLILRS AETYFTVLRA QDNLATSKAE EAAFKRQLDQ ANERFDVGLS
DKTDVLEAQA SYDTARANRL IAEQRVDDAF QALVTLTNRD YSAIEGMRHT LPVVPPAPND
AKAWVDTAVQ QNLRLLASNY AVNAAEETLR QRKAGHLPTL DAVAQYQKGD NDALGFANSA
ANPLVHYGKD VEERTIGLEL NIPIYTGGLT SSQVRESYQR LNQSEQSREG QRRQVVQDTR
NLHRAVNTDV EQVQARRQAI ISNQSSLEAT EIGYQVGTRN IVDVLNAQRQ LYAAVRDYNN
SRYDYILDTL RLKQAAGTLS PADLEALSAY LKQDYDPDKD FLPPDLAKAA AEQLQAQPRV
R
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