Gene PSPA7_5702 details

Gene Information

• Locus tag: PSPA7_5702
• Symbol: thiC
• ID: 5355226
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: -
• Start bp: 5870932
• End bp: 5872815
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640814747
• Product: thiamine biosynthesis protein ThiC
• Protein accession: YP_001351021
• Protein GI: 152984267
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0422] Thiamine biosynthesis protein ThiC
• TIGRFAM ID: [TIGR00190] thiamine biosynthesis protein ThiC

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCAA CGCAGAAGAA CAACATCACC CGCCTTGAGC AGCTCGACCG CCAGTCGACG 
CAGCCTTTCC CGAACTCGCG CAAGGTCTAC CTGACCGGCT CGCGCCCGGA CATACGCGTC 
CCGGTGCGGG AAATCTCCCT CGCCGACACC CCCACCGCCT TCGGCGGCGA AAAGAACCCG 
CCGGTGTTCG TCTATGACAC CTCCGGTCCG TATACCGACC CGGAGGTCCG CATCGACCTG 
CGTAAGGGCC TGCCTGACGT GCGTTCGCGC TGGATCGACG AGCGCGGCGA CACCGAGATC 
CTCCCCGGCC TGACTTCCGA GTTCGGCCAG GCGCGCCTGG CCGACGCCAG CCTCGATGCG 
CTGCGCTTCG CCCACGTGCG CACGCCGCGC CGGGCCAAGC CGGGCGCCAA CGTCTCGCAG 
ATGCATTACG CGAAGAAAGG CATCATCACC CCGGAGATGG AATACATCGC CATCCGCGAG 
AACATGAAGC TGCAGGAAGC CCGGGCCGCC GGCCTGCTCG ACCAGCAGCA CCCGGGGCAC 
AGCTTCGGCG CCAATATCCC GAAGGAAATC ACCCCCGAGT TCGTCCGCGA GGAAGTCGCC 
CGCGGCCGCG CGATCATTCC GGCGAACATC AACCACACCG AGCTTGAGCC GATGATCATC 
GGCCGCAATT TTCTGGTGAA GATCAACGGC AACATCGGCA ACAGCGCGCT GGGCTCGTCG 
ATCGAGGAAG AAGTGGAGAA GCTCACCTGG GGCATCCGCT GGGGCGCTGA CACGGTGATG 
GACCTGTCCA CCGGCAAGCA CATCCATGAA ACCCGCGAGT GGATCCTGCG CAACAGCCCG 
GTACCGATCG GCACCGTACC GATCTACCAG GCGCTGGAAA AGGTCAATGG CGTCGCCGAG 
GACCTGACCT GGGAAATCTT CCGCGACACC CTGATCGAAC AGGCCGAGCA GGGCGTCGAC 
TACTTCACCA TCCACGCCGG CGTGCTGCTG CGCTATGTGC CGCTGACCGC CAAGCGGGTC 
ACCGGCATCG TTTCCCGCGG CGGCTCGATC ATGGCCAAGT GGTGCCTGGC GCACCACAAG 
GAAAACTTCC TCTACACGCA TTTCGAAGAG ATCTGCGAAA TCATGAAGGC CTACGACGTC 
AGCTTCTCGC TGGGCGATGG CCTGCGCCCG GGCTCGGTGG CCGACGCCAA CGACGCCGCC 
CAGTTCGGTG AGCTGGAGAC CCTCGGCGAG CTGACCAAGA TCGCCTGGAA GCACGACGTG 
CAGGTGATGA TCGAAGGCCC CGGCCACGTG CCGATGCAAC TGATCAAGGA AAACATGGAC 
AAGCAGCTGG AGTGCTGCGA CGAGGCGCCG TTCTACACCC TCGGTCCGCT GACCACCGAC 
ATCGCTCCCG GCTACGACCA CATCACCTCG GGCATCGGCG CGGCGATGAT CGGCTGGTTC 
GGCTGCGCCA TGCTCTGCTA CGTCACGCCC AAGGAGCACC TGGGCCTGCC GAACAAGGAT 
GACGTGAAGA CCGGGATCAT CACCTACAAG ATCGCCGCCC ACGCCGCCGA CCTCGCCAAG 
GGCCACCCGG GCGCGCAGAT CCGCGACAAT GCGCTGTCCA AGGCGCGCTT CGAGTTCCGC 
TGGGAAGACC AGTTCAACCT CGGCCTGGAC CCGGACACCG CGCGGGCGTT CCATGACGAG 
ACGCTGCCGA AGGACTCGGC CAAGGTCGCG CACTTCTGCT CCATGTGCGG ACCGAAGTTC 
TGCTCGATGA AGATCACCCA GGAAGTCCGC GACTACGCCA AGGAGAACGG CCTGTCCGAC 
GAGAGCAAGG CCATCGAGGC CGGCTTCCAG GAGCAGGCGG CGCGCTTCAA GGATGAAGGT 
TCGGTGATCT ACAAGCAGGT GTAG 

 

Protein sequence

MSATQKNNIT RLEQLDRQST QPFPNSRKVY LTGSRPDIRV PVREISLADT PTAFGGEKNP 
PVFVYDTSGP YTDPEVRIDL RKGLPDVRSR WIDERGDTEI LPGLTSEFGQ ARLADASLDA 
LRFAHVRTPR RAKPGANVSQ MHYAKKGIIT PEMEYIAIRE NMKLQEARAA GLLDQQHPGH 
SFGANIPKEI TPEFVREEVA RGRAIIPANI NHTELEPMII GRNFLVKING NIGNSALGSS 
IEEEVEKLTW GIRWGADTVM DLSTGKHIHE TREWILRNSP VPIGTVPIYQ ALEKVNGVAE 
DLTWEIFRDT LIEQAEQGVD YFTIHAGVLL RYVPLTAKRV TGIVSRGGSI MAKWCLAHHK 
ENFLYTHFEE ICEIMKAYDV SFSLGDGLRP GSVADANDAA QFGELETLGE LTKIAWKHDV 
QVMIEGPGHV PMQLIKENMD KQLECCDEAP FYTLGPLTTD IAPGYDHITS GIGAAMIGWF 
GCAMLCYVTP KEHLGLPNKD DVKTGIITYK IAAHAADLAK GHPGAQIRDN ALSKARFEFR 
WEDQFNLGLD PDTARAFHDE TLPKDSAKVA HFCSMCGPKF CSMKITQEVR DYAKENGLSD 
ESKAIEAGFQ EQAARFKDEG SVIYKQV