Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5631 |
Symbol | |
ID | 5356264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 5797461 |
End bp | 5798222 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640814676 |
Product | putative short-chain dehydrogenase |
Protein accession | YP_001350952 |
Protein GI | 152985656 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGTCCA CCCTGTTCAT CACCGGCGCC ACCTCAGGCT TCGGCGAAGC CTGCGCCCGT CGTTTCGCCG AGGCCGGCTG GTCGCTGGTG CTCACCGGCC GTCGCGAGGA ACGCCTGCAG GCGCTGGCCG CCGAGCTGTC GGCGCAGACC CGGGTGCTGC CGCTGACCCT GGACGTACGC GACCGCGCGG CGATGCACGC GGCCGTGGAC AGCCTGCCGG AAGAGTTCGC CCGCCTGCGC GGCCTGATCA ACAACGCCGG CCTGGCGCTG GGCACCGACC CGGCGCAGTC CTGCGACCTG GACGACTGGG ACACCATGGT CGATACCAAC ATCAAGGGCC TGCTCTACAG CACCCGCCTG CTGCTGCCAC GGCTGATCGC CCACGGCGCC GGGGCGAGCA TCGTCAACCT CGGCTCGGTG GCCGGCCGCT GGCCCTACCC GGGCAGCCAC GTATACGGCG GCACCAAGGC CTTCGTCGAG CAGTTCTCGC TGAACCTGCG CTGCGACCTG CAGGGCACCG GGGTGCGCGT GACCAACCTG GAGCCGGGGC TGTGCGAAAG CGAGTTCTCC CTGGTCCGCT TCGGCGGCGA CCAGGCGCGT TACGACAAGA CCTACGCCGG GGCGCGGCCG ATCCAGCCGG AGGACATCGC CGAGACCATC TTCTGGATCA TGAACCAGCC CGCCCACCTG AACATCAACA GCCTGGAGAT CATGCCGGTG AGCCAGTCCT GGGCCGGCTT CGCCATCCAC CGCGAAAGCT GA
|
Protein sequence | MSSTLFITGA TSGFGEACAR RFAEAGWSLV LTGRREERLQ ALAAELSAQT RVLPLTLDVR DRAAMHAAVD SLPEEFARLR GLINNAGLAL GTDPAQSCDL DDWDTMVDTN IKGLLYSTRL LLPRLIAHGA GASIVNLGSV AGRWPYPGSH VYGGTKAFVE QFSLNLRCDL QGTGVRVTNL EPGLCESEFS LVRFGGDQAR YDKTYAGARP IQPEDIAETI FWIMNQPAHL NINSLEIMPV SQSWAGFAIH RES
|
| |