Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5623 |
Symbol | |
ID | 5356418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 5788931 |
End bp | 5790271 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640814668 |
Product | MFS family transporter |
Protein accession | YP_001350944 |
Protein GI | 152987589 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGGC AATCCGCTGC GGCGGTGATC GATGCTGCCC GCTTTAACCG TACTCACTGG CTGATCCTCG GCTGGGGGTG TTTCATCATG CTGTTCGACG GCTACGACAT GGTCATCTAC GGCTCGGTGG TGCCGCGGCT GATGCAGGAG TGGCAACTCA GCCCGGTGCA GGCCGGCACC CTGGGCAGTT GCGCGCTGTT CGGCATGCTC TTCGGCGGTA CCCTGCTGGC GCCGCTGGCC GACCGCTTCG GCCGGCGCCG CCTGGTGATC GCCACCACCC TGCTGGCGAG CCTCGCCGCC TTCCTAACCG GCCACGCCCG CGACCCGCTG GAGTTGGGCG CCGGTCGCTT CTTCACCGGC CTGGCGCTCG GCGCGCTGGT GCCCAGCGCG ATCAACCTGA TCAGCGAGTT CGCCCCGGCC GGCCGGCGCA GTACCCTGGT CACGGTGATG TCGGCGTTCT ACTCGGTCGG CGCGGTGCTT TCGGCGCTGC TGGCGATCGT GATGATTCCG GCCTGGGGCT GGCAGTCGGT GTTCTACGTG GCGGTGCTGC CGGTGCTGGC GGTGCCGCTG ATGCTGCGCT GGCTGCCGGA GTCGGCGGCG TTCCTCGAAC TCAAGGGGCG GCGCGCCGAA CTGGACGCGC TGCTGCTCAG GGTCGATCCC GCCTACCGGC CCGGTACCCA ACTGCCGGTC GGCGCCGCGC CGGAGCGCGC GCGCGGACGG GTCGCCCAGT TGTTCGACGG CCGCCAGGCG CTCGGCACCC TGCTGCTGTG GCTGGCATTC GCCATGTGCA TGCTGATGAG CTACGGGCTC AACACCTGGC TGCCGAAACT GATGGCCGGC GGCGGCTATG CCCTGGGCTC GAGCCTGGCG TTCCTGGTCA CCCTCAACAT CGGTGCCACC CTCGGCGCGC TGTTCGGCGG CTGGCTGGCC GACCGTCTCG GCGCCGGCCG CACCCTGGTG CTGTTCTTCG CCCTGGCCGC GGCGTCGCTC GCGGCCCTCG GCCTGCGCCC CGGACCCTGG TTGCTCAATA CCCTGCTGGT GGTGGCCGGC GCCACCACCA TCGGCACCCT GGCGGTGATC CACGCCTACG CCGCGCAGTT CTACCCGGCC TGGGTGCGCT CCACCGGGGT CGGCTGGGCC GCCGGGGTCG GCCGCCTCGG CGCCATCGCC GGGCCACTGC TCGGTGGCAG CCTGCTGGCA CTGGAACTGC CGTTCCAGCA GAACTTCCTG GCTTTCGCCG TGCCCGGCGT GGTCGGCGCG CTGGCGATCG CCTGCATCCA CCTGCGGCCG CGCGTGACGG CGCAAGCGCC TGTCGATGCG GCGGCGAAGA AACCCCTGTG A
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Protein sequence | MNRQSAAAVI DAARFNRTHW LILGWGCFIM LFDGYDMVIY GSVVPRLMQE WQLSPVQAGT LGSCALFGML FGGTLLAPLA DRFGRRRLVI ATTLLASLAA FLTGHARDPL ELGAGRFFTG LALGALVPSA INLISEFAPA GRRSTLVTVM SAFYSVGAVL SALLAIVMIP AWGWQSVFYV AVLPVLAVPL MLRWLPESAA FLELKGRRAE LDALLLRVDP AYRPGTQLPV GAAPERARGR VAQLFDGRQA LGTLLLWLAF AMCMLMSYGL NTWLPKLMAG GGYALGSSLA FLVTLNIGAT LGALFGGWLA DRLGAGRTLV LFFALAAASL AALGLRPGPW LLNTLLVVAG ATTIGTLAVI HAYAAQFYPA WVRSTGVGWA AGVGRLGAIA GPLLGGSLLA LELPFQQNFL AFAVPGVVGA LAIACIHLRP RVTAQAPVDA AAKKPL
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