Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5607 |
Symbol | irlR |
ID | 5359469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 5771997 |
End bp | 5772686 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640814652 |
Product | two-component response regulator |
Protein accession | YP_001350928 |
Protein GI | 152985885 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCATCC TGGTGGTCGA AGACGACGCG AAGACCGGCG AATACCTGAA GAAGGGCCTC GGCGAGTCGG GCTATGCGGT CGACTGGTCG CGGCACGGCG CCGACGGCCT CTACCTGGCG CTGGAGAACC GCTACGACCT GGTGGTCCTC GACGTGATGC TGCCCGGCCT GGACGGCTGG CAGATCATGG AGGTGCTGCG CAAGAAGCAC GACGTGCCGG TGCTCTTCCT CACCGCCCGC GACCAGTTGC AGGACCGCAT CCGTGGCCTC GAGCTGGGTG CCGACGACTA CCTGGTGAAA CCCTTCTCCT TCACCGAACT GCTGCTGCGC ATCCGCACCC TGCTGCGCCG CGGCGTGGTA CGCGAGGCCG AGCAGGTGCA GCTCGCCGAC CTGCACCTGG ACGTGCTGCG GCGCAAGGTC AGCCGCCAGG GCCAGCTGAT CGCCCTGACC AACAAGGAGT TCGCCCTCCT GCACCTGCTG ATGCGCCGCG AGGGCGAGGT GCTGTCGCGC ACCCTGATCG CCTCGGAGGT CTGGGACATG AATTTCGACA GCGATACCAA CGTCGTCGAC GTGGCGATCA AGCGCCTGCG CGCCAAGGTC GACAATCCCT TCCCGAACAA GCTGATCCAT ACCGTGCGCG GCATCGGCTA CGTCTGCGAG GAGCGCCCGT GCCCGCCCGC CGCTCCCTGA
|
Protein sequence | MRILVVEDDA KTGEYLKKGL GESGYAVDWS RHGADGLYLA LENRYDLVVL DVMLPGLDGW QIMEVLRKKH DVPVLFLTAR DQLQDRIRGL ELGADDYLVK PFSFTELLLR IRTLLRRGVV REAEQVQLAD LHLDVLRRKV SRQGQLIALT NKEFALLHLL MRREGEVLSR TLIASEVWDM NFDSDTNVVD VAIKRLRAKV DNPFPNKLIH TVRGIGYVCE ERPCPPAAP
|
| |