| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5436 |
|---|
| Symbol | trmA |
|---|
| ID | 5354353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 5601283 |
|---|
| End bp | 5602374 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640814481 |
|---|
| Product | tRNA (uracil-5-)-methyltransferase |
|---|
| Protein accession | YP_001350760 |
|---|
| Protein GI | 152985732 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
|---|
| TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.33798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGTC CGCAGTTCGA CCCCGCCGCC TACGCCGCGC AACTGGAAGA CAAGAAGGCC
CGCCTCGCCG GGTTGCTGGC GCCGTTCGCG GCGCCCGCGC CGGAAGTCTT CGAGTCGCCG
CGCGAGCACT ACCGCCTGCG CGCCGAATTC CGCCTGTGGC GGGAGACCGG CAACGAGAAC
CGCCACTACG CGATGTTCGA ACAGGGCGAC AAGCACACCC CGATCCTGAT CGAGGACTTC
CCCATCGCCA GCCGCCGCAT CAACGAGCTG ATGCCGCGCC TGAAGGACGC CTGGGCCGAG
CCGGCGCTGG GCTTCAAGCT GTTCCAGGTG GAGTTCCTTA CCACCCTGGC CGGCGACGCC
CTGATCACCC TTTGCTACCA CCGGCCGATC GACGCCGCCT GGCAGCAGGC GGCAGAAGCG
CTCGCCGCGG AACTGGGCGT GAGTCTGGTC GGCCGTTCGC GCGGCAAGCG CATCGTCGTC
GGCCGCGACT ACGTGGAAGA GGAACTGCTG GTCGCCGGCC GGCGCTTCCG CTACCGCCAG
CCCGAAGGCG CCTTCACCCA GCCCAACGGC GAAGTGAACC AGAAGATGCT CGGCTGGGCC
TACGAGGCGC TCGGCGAGCG CGAAGACGAC CTGCTCGAAC TGTACTGCGG CAACGGCAAC
TTCACCCTGC CGCTGGCCAC CCGGGTGCGC AAGGTGCTGG CCACCGAGAT CAGCAAGTCG
TCGGTCAACG CGGCGCTGGC CAACCTGGCC GACAACGCGG TGGACAACGT CAGCCTGGTG
CGCCTGTCCG CCGAGGAGCT GACCCAGGCG CTGAACGAGG TCCGCCCGTT CCGCCGCCTG
GCCGACATCG ACCTGAAGAG CTACGCCTTC GGCAGCGTGT TCGTCGACCC GCCGCGCGCC
GGCATGGACC CGGACACCTG CGAGCTGACC CGGCGCTTCG AACGCATCCT GTACATCTCG
TGCAACCCGG AAACCCTGGC GCAGAACATC GCCCAGCTGC ACGACACGCA CCGGATCAGC
CGCTGCGCGC TGTTCGACCA GTTCCCCTAC ACCCACCACA TGGAAAGCGG CGTCCTCCTC
GAACGCCGCT GA
|
|---|
| Protein sequence | MSRPQFDPAA YAAQLEDKKA RLAGLLAPFA APAPEVFESP REHYRLRAEF RLWRETGNEN
RHYAMFEQGD KHTPILIEDF PIASRRINEL MPRLKDAWAE PALGFKLFQV EFLTTLAGDA
LITLCYHRPI DAAWQQAAEA LAAELGVSLV GRSRGKRIVV GRDYVEEELL VAGRRFRYRQ
PEGAFTQPNG EVNQKMLGWA YEALGEREDD LLELYCGNGN FTLPLATRVR KVLATEISKS
SVNAALANLA DNAVDNVSLV RLSAEELTQA LNEVRPFRRL ADIDLKSYAF GSVFVDPPRA
GMDPDTCELT RRFERILYIS CNPETLAQNI AQLHDTHRIS RCALFDQFPY THHMESGVLL
ERR
|
|---|
| |