| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5426 |
|---|
| Symbol | |
|---|
| ID | 5356068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 5591294 |
|---|
| End bp | 5593588 |
|---|
| Gene Length | 2295 bp |
|---|
| Protein Length | 764 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640814471 |
|---|
| Product | outer membrane hemin receptor |
|---|
| Protein accession | YP_001350750 |
|---|
| Protein GI | 152987501 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTCG CCCCGCCCTT CGCCCTGCGC CCCTGCCTGG CCCTGCTGCT GCTCAGCCCT
TCGCTGGCCC TGGCGGGGAA TGCCGTCCCG CTGACCCCGA CCACCATCAC CGCGACCCGC
ACCGAGCAGG CGGTGGACGC TGTGCCGAGC ACCGTCAGCG TCCAGACCCG CGAGCAACTG
GACCGGCAGA ACGTCAACAA CATCAAGGAA CTGGTGCGCT ACGAACCCGG TGTCTCGGTC
GGCGGCACCG GCCAGCGCGC CGGGATCACC GGCTACAACA TCCGCGGCAT CGACGGCAAC
CGCATCCTCA CCCAGATCGA CGGGGTCGAG CTGCCCAACG ACTTCTTCAG CGGCCCCTAC
GCCCAGACCC ACCGCAACTA CGTCGACCCG GACATCGTCA AGCGCGTGGA AATCCTCCGC
GGCCCGGCCT CGGCGCTGTA CGGCAGCAAC GCCATCGGCG GCGCGGTGAG CTACTTCACC
CTCGATCCAT CAGACATCAT CAAGGACGGC AAGGACGTCG GCGCCCGCCT GAAGACCGGC
TACGAGTCGG CCAGCCATTC CTGGCTGACC TCGGCCACCG TCGCCGGCCG CGCCGACGAC
TTCGACGGCC TGCTGCACTA TGGTTACCGC CAGGGCCACG AGACCGAATC CAACGGCGGC
CACGGCGGCA CCGGACTCTC GCGCAGCGAA GCCAACCCGG AGGACGCCGA CAGCTACAGC
CTGCTCGGCA AGCTGGGCTG GAACTACGCC GAAGGCAGCC GTTTCGGGCT GGTCTTCGAG
AAGTACAAGA GCGACGTCGA CACCGACCAG AAGAGCGCCT ATGGCGGCCC CTACGACAAG
GGCAAGCCGG CGATACCGCC GAGCGTGCTG CCGGGCGGCA TGTACCAGTG GCGCAAGGGC
AACGACACCC TGACCCGCGA ACGCTACGGC CTGGAACACC ACTTCCTGGT CGACAGCCCG
GTCGCCGACC GCATCCAGTG GAGCCTCAAC TACCAGGTGG CGAAGACCGA CCAGGCGACC
CGCGAGTTCT ACTATCCGAT TACCCGCAAG GTCCTGCGCA CCCGCGATAC CACCTACAAG
GAACGCCTGT GGGTGTTCGA CAGCCAGTTG GACAAGAGCT TCGCCATCGG CGAGACCGAC
CACCTGCTGA GCTACGGGAT CAACCTCAAG CAGCAGAAGG TCACCGGCAT GCGCAGCGGT
ACCGGCACCA ACCTGCAGAC CGGCGCCGAG AGCCCGCGCG ACGCCCTGGA GCGCAGCAGC
GACTTCCCCG ACCCGACGGT GAAGACCTAC GCCCTGTTCG CCCAGGACAG CATCAGGTGG
AACGACTGGA CCTTCACCCC CGGGCTGCGC TACGACTACA CGCGCATGGA GCCGCACATC
ACCGACGAGT TCCTGCGCAC CATGAAGCAG AGCCAGAACA CCACGGTCGA CGAGTCGGAC
AAAAAATGGC ACCGGGTCTC GCCCAAGTTC GGCGTGACCT ATGACTTCGC CCAGCACTAC
ACCTGGTACG GCCAGTACGC CCAGGGCTTC CGCACGCCCA CGGCGAAGGC GCTGTACGGG
CGCTTCGAGA ACCTGCAGGC CGGCTACCAC ATCGAGCCGA ACCCGAACCT CAAGCCGGAG
AAGAGCCAGA GCTTCGAGAC CGGCCTGCGC GGCAAGTTCG ACGAAGGCAG CTTCGGCGTG
GCGGTGTTCT ACAACAAGTA CCGCGACTTC ATCGACGAGG ACGCACTGAA CACCGCTGGC
ACCGGCGGCA ACGGCCAGAC CTTCCAGGCC AACAATATCG AGCGCGCGGT GATCAAGGGC
GTGGAACTCA AGGGCCGCCT GGAGCTCGGC GCCCTCGGCG CGCCGCAGGG CCTCTACACC
CAGGCCAGCG TGGCCTACGC CCATGGCCGC AACAAGGACA ACGGCGAGCC GATCAACAGC
GTCAACCCGC TCACCGGCGT GTTCGGCCTC GGCTACGACG AGGCCGGCGG CAACTACGGC
GGCCTGCTCA GCTGGACCCT GGTCAAGCGC AAGGACCGCG TCGACGACAG CACCTTCCAC
ACCCCGGACG GCACCGCCAG TCAGTTCAAG ACCCCGGGCT TCGGCGTTCT CGACCTCAGC
GCCTACTACA AGTTGAGCAA GGACCTGACC CTCAACGCCG GCCTCTACAA CCTGACCGAC
AAGAAGTACT GGCTGTGGGA CGACGTACGC GGCTACGACG GCGTCGGCGA GGCTTCGGCG
CTGGCCCCGG CGAACCTCGA CCGGCTGTCC CAGCCGGGAC GCAACTTCGC GGTCAACCTG
GTCTGGGACA TCTGA
|
|---|
| Protein sequence | MSLAPPFALR PCLALLLLSP SLALAGNAVP LTPTTITATR TEQAVDAVPS TVSVQTREQL
DRQNVNNIKE LVRYEPGVSV GGTGQRAGIT GYNIRGIDGN RILTQIDGVE LPNDFFSGPY
AQTHRNYVDP DIVKRVEILR GPASALYGSN AIGGAVSYFT LDPSDIIKDG KDVGARLKTG
YESASHSWLT SATVAGRADD FDGLLHYGYR QGHETESNGG HGGTGLSRSE ANPEDADSYS
LLGKLGWNYA EGSRFGLVFE KYKSDVDTDQ KSAYGGPYDK GKPAIPPSVL PGGMYQWRKG
NDTLTRERYG LEHHFLVDSP VADRIQWSLN YQVAKTDQAT REFYYPITRK VLRTRDTTYK
ERLWVFDSQL DKSFAIGETD HLLSYGINLK QQKVTGMRSG TGTNLQTGAE SPRDALERSS
DFPDPTVKTY ALFAQDSIRW NDWTFTPGLR YDYTRMEPHI TDEFLRTMKQ SQNTTVDESD
KKWHRVSPKF GVTYDFAQHY TWYGQYAQGF RTPTAKALYG RFENLQAGYH IEPNPNLKPE
KSQSFETGLR GKFDEGSFGV AVFYNKYRDF IDEDALNTAG TGGNGQTFQA NNIERAVIKG
VELKGRLELG ALGAPQGLYT QASVAYAHGR NKDNGEPINS VNPLTGVFGL GYDEAGGNYG
GLLSWTLVKR KDRVDDSTFH TPDGTASQFK TPGFGVLDLS AYYKLSKDLT LNAGLYNLTD
KKYWLWDDVR GYDGVGEASA LAPANLDRLS QPGRNFAVNL VWDI
|
|---|
| |