Gene PSPA7_5317 details

Gene Information

• Locus tag: PSPA7_5317
• Symbol: lolB
• ID: 5356919
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 5477272
• End bp: 5477889
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 640814363
• Product: outer membrane lipoprotein LolB
• Protein accession: YP_001350649
• Protein GI: 152983683
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis
• TIGRFAM ID: [TIGR00548] outer membrane lipoprotein LolB

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.308069
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTCTAC GTCTTTTCCT CGCCGCCTCC GCGCTGGCCC TGCTCAGCGG CTGCGCCGGC 
CTGACCTCCC ACGAAGCCCT GGAAGGCCAG GGCGATGCGC AGACCTGGAA AACCCACAAG 
CAACAGCTCA GCGAGCTGGA TGCCTGGCAG ATCGACGGCA AGGTCGGCAT CCGCGCCCCG 
CGCGACTCCG GCAGCGGGAC TCTGTTCTGG CTGCAGCGCC AGGGCTACTA CGACATCCGC 
CTGTCCGGCC CGCTCGGCCG CGGCGCCGCC CGCCTGACCG GGCGTGAAGG CGCGGTGAGC 
CTGGAAGTCG CCGGGCAGGG CCGCTACCAG GCGGAATCCC CGGAAGCCCT GCTGGAACAA 
CAGCTCGGCT GGCGCCTGCC GGTCTCGCAC CTGCTCTGGT GGGTGCGCGG CCTCCCCGCG 
CCGGACAGCA AGAGCCGCCT GACCCTCGAC GCCGACAGCC GCCTGGCGCG CCTGGAACAG 
GACGGCTGGC AGATCGAATA CACCCGCTAC GCCGAGCAGA ACGGCTACTG GCTGCCCGAG 
CGCCTGAAGC TGCACGGCCA GGACCTCGAC ATAACCCTGG TGATCAAGGA CTGGCAGCCG 
CGCCAGCTCG GCCGCTGA 

 

Protein sequence

MRLRLFLAAS ALALLSGCAG LTSHEALEGQ GDAQTWKTHK QQLSELDAWQ IDGKVGIRAP 
RDSGSGTLFW LQRQGYYDIR LSGPLGRGAA RLTGREGAVS LEVAGQGRYQ AESPEALLEQ 
QLGWRLPVSH LLWWVRGLPA PDSKSRLTLD ADSRLARLEQ DGWQIEYTRY AEQNGYWLPE 
RLKLHGQDLD ITLVIKDWQP RQLGR