| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5306 |
|---|
| Symbol | |
|---|
| ID | 5358354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 5465360 |
|---|
| End bp | 5466343 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640814352 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001350638 |
|---|
| Protein GI | 152987397 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3380] Predicted NAD/FAD-dependent oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCC CCATCGCCAT CATCGGTACT GGCATCGCCG GGCTTTCCGC CGCCCACGCA
TTGAGGTCCG CCGGCCAGAC CGTGCAACTG TTCGACAAGG GCCACGGCAG CGGCGGCCGC
ATGGCCAGCA AGCGCAGCGA GGCCGGCACG CTGGACCTCG GCGCGCAATA CTTCACCGCC
CGCGACCGGC GCTTCCTCGA CGCCTTGCAA CACTGGCGCG AGGAGGGCTG GGTGGACGAG
TGGCAACCCG CGCTCTACCA ATATCGCGAC GGCCAGTTGA GCCCGTCCCC GGACGAACAG
CCACGCTGGG TCGGCATCCC ACGGATGAGC GCGATCACCC GCGCCCTGCT CACCGATCTA
CCGGTGGTCT TCTCCTGCCG CATCACCGAG GTCTTCCGCG GCAAGCAGCA CTGGCACCTG
CAGGACGCCG AGGGACAGAA CCACGGTCCG TTCAACCAGG TCCTGATCGC CCTCCCGGCC
CCCCAGGCCA CGCCGCTGCT GGCCAGCGTG CCGAAGCTGG CGGCCACCGC CGCGAGCGTG
GTCATGGAGC CGACCTGGGC GGTGGCGCTG GGCTTCCGCG AGGTCCTCGA CACCCCGGTG
CAGGGCTGCT TCGTACACGA CAGCCCGATC GCCTGGCTGG CCTGCAACCG CAGCAAGCCG
GGGCGCGACA CCGCCCTCGA CACCTGGGTG CTGCACGCCA CCAGCCAATG GAGCCGGCAG
CACATCGACA TGGCCAAGGA AGACGTGGTC GAGCACCTGC GCTGCGCCTT CGCCGAAGTG
ATCGGCTGCG CCGTGCCGGA AGCCGCCTTC AGCATCGCCC ACCGCTGGCT CTATGCGCGC
CCGGCGGAAG CCCACCAGTG GGGCGCCCTC GGCGATCCCG ACCTGGGCAT CTACGCCTGC
GGCGACTGGT GCTCCAGCGG TCGCGTCGAG GGCGCCTGGC TCAGCGGTCA GGAAGCCGCG
CGGCGCCTGC TGGAACATCT CTGA
|
|---|
| Protein sequence | MSVPIAIIGT GIAGLSAAHA LRSAGQTVQL FDKGHGSGGR MASKRSEAGT LDLGAQYFTA
RDRRFLDALQ HWREEGWVDE WQPALYQYRD GQLSPSPDEQ PRWVGIPRMS AITRALLTDL
PVVFSCRITE VFRGKQHWHL QDAEGQNHGP FNQVLIALPA PQATPLLASV PKLAATAASV
VMEPTWAVAL GFREVLDTPV QGCFVHDSPI AWLACNRSKP GRDTALDTWV LHATSQWSRQ
HIDMAKEDVV EHLRCAFAEV IGCAVPEAAF SIAHRWLYAR PAEAHQWGAL GDPDLGIYAC
GDWCSSGRVE GAWLSGQEAA RRLLEHL
|
|---|
| |