| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5243 |
|---|
| Symbol | glyA |
|---|
| ID | 5357452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 5398621 |
|---|
| End bp | 5399874 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640814289 |
|---|
| Product | serine hydroxymethyltransferase |
|---|
| Protein accession | YP_001350575 |
|---|
| Protein GI | 152985153 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.383038 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAGCC GTGATTTGAC CCTCGCCCGC TACGATGCCG AACTCTTTGC CGCGATGGAG
CAGGAAGCCC AGCGCCAGGA AGAGCACATC GAGCTGATCG CCTCCGAGAA CTACACCAGC
CCGGCGGTGA TGGAAGCCCA GGGTTCGGTG CTGACCAACA AGTACGCCGA AGGCTACCCG
CACAAGCGCT ACTACGGTGG CTGCGAGTAC GTCGACATCG TCGAGCAACT GGCCATCGAC
CGCGCCAAGC AACTGTTCGG CGCCGACTAC GCCAACGTCC AGCCGCATGC CGGCTCCCAG
GCCAACGCGG CGGTCTACCT GGCCCTGCTG TCGGCCGGCG ACACCATCCT CGGCATGAGC
CTGGCCCACG GCGGCCACCT GACCCACGGC GCCAGCGTCT CCTCCTCCGG CAAGCTGTAC
AACGCCGTGC AGTACGGCAT CGACGCCAAC GGTCTGATCG ACTATGACGA AGTCGAGCGC
CTGGCCGTCG AGCACAAGCC GAAGATGATC GTCGCCGGCT TCTCCGCCTA TTCCCAGGTC
CTCGACTTCC CGCGCTTCCG CGCCATCGCC GACAAGGTCG GCGCCTACCT GTTCGTCGAC
ATGGCCCACG TCGCCGGGCT GGTCGCCGCT GGCGTCTACC CGAACCCGGT GCCGTTCGCC
GACGTGGTCA CCACCACCAC CCACAAGACC CTGCGCGGTC CGCGCGGCGG CCTGATCCTG
GCGCGCGCCA ACGAAGAGAT CGAGAAGAAG CTCAACTCCG CGGTATTCCC CGGCGCCCAG
GGCGGTCCGC TGGAACACGT GATCGCGGCC AAGGCGGTGT GCTTCAAGGA AGCCCTGCAG
CCGGAGTTCA AGACCTACCA GCAGCAGGTC CTGAAGAACG CCCAGGCGAT GGCCCAGGTC
TTCATCGACC GCGGCTTCGA CGTGGTTTCC GGCGGCACCC GGAACCACCT GTTCCTGCTA
TCCCTGATCA AGCAGGACAT CACCGGCAAG GACGCCGACG CCGCTCTCGG CCGCGCGTTC
ATCACCGTGA ACAAGAACTC GGTCCCGAAC GACCCGCGCT CGCCTTTCGT CACCTCCGGC
CTGCGCATCG GTACCCCGGC CGTGACCACC CGTGGCTTCA AGGAGGCCGA ATGCCGCGAG
CTGGCCGGCT GGATCTGCGA CATCCTCGAG AACATGGGCG ACGAGTCCGT GGTCGACGGC
GTACGCGAGA AGGTCAAGGC GATCTGCGCC AAGTTCCCGG TCTACGGCAA CTAA
|
|---|
| Protein sequence | MFSRDLTLAR YDAELFAAME QEAQRQEEHI ELIASENYTS PAVMEAQGSV LTNKYAEGYP
HKRYYGGCEY VDIVEQLAID RAKQLFGADY ANVQPHAGSQ ANAAVYLALL SAGDTILGMS
LAHGGHLTHG ASVSSSGKLY NAVQYGIDAN GLIDYDEVER LAVEHKPKMI VAGFSAYSQV
LDFPRFRAIA DKVGAYLFVD MAHVAGLVAA GVYPNPVPFA DVVTTTTHKT LRGPRGGLIL
ARANEEIEKK LNSAVFPGAQ GGPLEHVIAA KAVCFKEALQ PEFKTYQQQV LKNAQAMAQV
FIDRGFDVVS GGTRNHLFLL SLIKQDITGK DADAALGRAF ITVNKNSVPN DPRSPFVTSG
LRIGTPAVTT RGFKEAECRE LAGWICDILE NMGDESVVDG VREKVKAICA KFPVYGN
|
|---|
| |