| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5209 |
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| Symbol | ispB |
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| ID | 5357544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 5355650 |
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| End bp | 5356618 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640814255 |
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| Product | octaprenyl-diphosphate synthase |
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| Protein accession | YP_001350541 |
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| Protein GI | 152985492 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.465308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACCCC AGGCCTTCTA CCGCGTGGTG GCGGAAGATT TCACCGCCGT CGACGGGATC
ATCCGTCGCC AACTCACCTC TCGCGTTCCC CTGGTGGAAA AGATCGGCGA CTACATCATC
TCCGCCGGTG GCAAGCGCCT GCGCCCGCTG CTGGTCCTGC TCGCCGGCAA GACCCTGGGC
TACAAGGGCG ACGATCTGTG CCTGCTGGCG GCCACCATCG AGTTCCTGCA CACCTCCACC
CTGCTCCACG ACGACGTGGT CGACGCCTCC GGCCTGCGCC GCGGCCGCTC CACCGCCAAC
GCCCTGTGGG GCAACGCGCC GAGCGTGCTG GTGGGCGATT TCCTCTATGC CCGCTCCTTC
GAAATGATGG TCGAACTCGG CTCAATGCCG GTCATGCGCA TCATCTCCCA GGCCACCCGG
GTGATCGCCG AGGGCGAAGT GCTGCAACTG TCCAAGGTGC GCGACGCCAG CACCACAGAA
GAGACCTACA TGGAAGTCAT CCGCGGCAAG ACCGCGATGC TCTTCGAGGC CTCGACCCAT
AGCGCCGCCG CGCTGTGCCG GGCCGGCGAG GAACAGGCCG AGGCGCTGCG CCGCTTCGGC
GACTACCTGG GAATCGCCTT CCAGCTGGTC GACGACCTGC TCGACTACCG CGGCGACGCC
GCCACCCTGG GCAAGAACGT CGGCGACGAC CTCGCCGAGG GCAAACCGAC CCTGCCGCTG
ATCGTCACCA TGCGCGACGG TACCGAGGAA CAGGCGGCGC TGGTGCGCAA GGCCATCCAG
CAAGGCGGCA GCCAGGACCT GGAGAGTGTC TGCGCGGCCG TCGAGGCCGC TGGCGCCCTG
GACTACACCG CCAACCTGGC CCGCGACTAC GCGGCGCGCG CCATCGCCTG CCTGGAAAGC
CTGCCGGACA ACGAGTACCG CGCCGCCCTG GTCGAACTCA GCGAATTCGC GGTCGCCCGC
ACCCACTGA
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| Protein sequence | MQPQAFYRVV AEDFTAVDGI IRRQLTSRVP LVEKIGDYII SAGGKRLRPL LVLLAGKTLG
YKGDDLCLLA ATIEFLHTST LLHDDVVDAS GLRRGRSTAN ALWGNAPSVL VGDFLYARSF
EMMVELGSMP VMRIISQATR VIAEGEVLQL SKVRDASTTE ETYMEVIRGK TAMLFEASTH
SAAALCRAGE EQAEALRRFG DYLGIAFQLV DDLLDYRGDA ATLGKNVGDD LAEGKPTLPL
IVTMRDGTEE QAALVRKAIQ QGGSQDLESV CAAVEAAGAL DYTANLARDY AARAIACLES
LPDNEYRAAL VELSEFAVAR TH
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