Gene PSPA7_5196 details

Gene Information

• Locus tag: PSPA7_5196
• Symbol: pilE
• ID: 5359656
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 5343295
• End bp: 5343720
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 640814242
• Product: type 4 fimbrial biogenesis protein PilE
• Protein accession: YP_001350528
• Protein GI: 152984807
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4968] Tfp pilus assembly protein PilE
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAAAA AAGAGAAAGG CTTCACCTTG CTGGAGATGA TGATCGTCGT GGTGCTGATC 
GGCATCCTCC TCGGCATCGC CATTCCCAGC TACCAGAACT ACGTGATCCG CGCCAACCGC 
ACCGAAGGCC AGGCGCTGCT CTCGGACGCG GCAGCACGCC AGGAGCGCTA CTATTCGCAG 
AACCCCGGGG TCGGTTACAC CAACGACGTG GCCAAGCTGG GCATGAGCTC GGCCAACTCG 
CCGAACAATC TGTACAGCCT CACCATAGCG ACGCCCACCA GTACCACCTA TACCCTGACC 
GCCACGCCGA TCAACTCGCA GACCCGCGAC AAGACCTGCG GCAAGCTGAC CCTCAATCAG 
CTCGGCGAAC GCGGCGCAGC CGGCAAGACC GGCAACAACA GCACCGTCAA TGACTGCTGG 
CGCTGA 

 

Protein sequence

MTKKEKGFTL LEMMIVVVLI GILLGIAIPS YQNYVIRANR TEGQALLSDA AARQERYYSQ 
NPGVGYTNDV AKLGMSSANS PNNLYSLTIA TPTSTTYTLT ATPINSQTRD KTCGKLTLNQ 
LGERGAAGKT GNNSTVNDCW R