| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5176 |
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| Symbol | |
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| ID | 5353740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 5320361 |
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| End bp | 5322121 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640814222 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001350511 |
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| Protein GI | 152984738 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.058555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATGC CGCCTCGCCC CGATGATTTT CCGCTGAACC ACGCTCCGCT ACCGTCCGCC
ACCCACCGGC CACCCCGCAA CCAGGCCCTG CCCGGCCACC GCGCCGGCCT TGCCGGCCTG
GCGCTGCTGC TCTCCAGTTT CGGCGCCACG GCCGCGCCTC CCTCGGTACC GGATGCCGGC
CAAGCCTTGC GCGATGCGCA AAGCAATCGC CTCAGCCTGC CCGACCCGGT GAAGCTGGAT
CCGGAAAAAC CCAAGCCGCA AGACAAGGTC GCGGCCGACG CGGTGCCGGA GGGCCCACGC
GTGCTGGTCA AGGAGTTCCG GGTGGGTGGC AATCGGGTAT TCGACTCCAC GCGACTGCTG
GCCCTGCTCG CCGACCTCCA GGGAAGGGAG CTGAGCCTGG CGCAGTTGCA TGCCGCCGCC
GAGCGGATCG GCGAGTTCTA TCAGCAGCAG GGCTATGTGC TGGCCCGTGC CTACCTGCCC
GCCCAGGAGA TCGACAACGG CGCGGTTCGC ATCGAGGTCG TCGAGGGACG CTACGGCCAG
GTCGACTTGC GGAATACCTC GCGCACCCTC GACCGGGTAT TGCGACAACC CCTCTCCGCC
CTGGAAAGCG GCAACGCGGT GAAGGGTGAC GAACTCGAGC GCAGCCTGCT GCTGCTCAGC
GACATTCCGG GCGTGGAGGC CAAGGGCACC CTGCTGCCGG GCCAGGCGCC CGGCACCACC
GACCTGCGCA TCGACGCCCA GCCGGCGCCA CTGCTCAGCG GCCGCCTGGA GGCGGATAAC
TACGGCGACT TCTACATGGG CGAGTATCGC CTGGGCGGCG TCCTCGACAT CAACAGTCCG
CTGCGCCTGG GCGACCAGTT GAACCTGCGC CTGCTCGGCA GCGACCGCCA CCAGCGCTAC
TACCGGGCCG CCTACCAGTT GCCGGTGGGG CCGTGGGGCT CGCGGGTCGG CCTGGCACGT
TCGGAAACCT CCTATCGGCT GGCCCGCGAC TTCACTGAGC TGGAGGCTCA CGGGCGCGCC
ACCATCGACA GCCTGTTCCT CGCCCAGCCG CTGCTACGCG GCCGGGCCTT CAACCTCTCT
ACGCAGCTGC AATTCGAGAA CAAGCGGCTG CGCGACGACA TCGATCTCTT CGATTACAGC
AAGCACAAGA AAATCCGCCT CTGGACGGCG GGCCTCAGCG GCAACAGCCA GGACCGGTTG
CTCGGCGGCG GCCAGAACGG CTTCTCCGTG GCCTACGGCC ATGGCCGGCT GGACATGAAC
AGCATGGAGC GCCGCGCCGA CAGGCGAACA GCCGGTGCCG TGGGCCGTTT CGACAAGCTC
AGCGTCAACG CCGTACGCCT GCAACGCGTG ACCGACCGCC TGCAATTGTT CACCCAGCTC
AACGCCCAGT GGGCCAGCGG CAACCTCGAC AGCGCGGAGA AATTCGACAT CGGCGGCCCC
TACGGCGTAC GCGCCTTCCC CGCGGGCACC GGCCGAGGCG TCGGCGACGA AGGCTGGCAG
GCCAGCGCGG AGCTGCGCTA CAGCCTGGCG CCCGGCTGGC AACTGAGCAC CTTCGTCGAC
CAGGGCGCGG TGAAGTTCCA GAAGAGCCCC TGGACCCCGG AAAGCAACCA CAACCGCATG
GGTGGCGCCG GCACCGGCGC CACCTGGTAC GGGGCGGACC ACCAGGTCAG CCTGACCGCC
GCCTGGCCGC TCGGCCAGGA GCGCGACACC GTCCCCAAAC GCACCCCGCG CCTGTGGCTG
CAGGCGACCC GCTATTTCTG A
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| Protein sequence | MTMPPRPDDF PLNHAPLPSA THRPPRNQAL PGHRAGLAGL ALLLSSFGAT AAPPSVPDAG
QALRDAQSNR LSLPDPVKLD PEKPKPQDKV AADAVPEGPR VLVKEFRVGG NRVFDSTRLL
ALLADLQGRE LSLAQLHAAA ERIGEFYQQQ GYVLARAYLP AQEIDNGAVR IEVVEGRYGQ
VDLRNTSRTL DRVLRQPLSA LESGNAVKGD ELERSLLLLS DIPGVEAKGT LLPGQAPGTT
DLRIDAQPAP LLSGRLEADN YGDFYMGEYR LGGVLDINSP LRLGDQLNLR LLGSDRHQRY
YRAAYQLPVG PWGSRVGLAR SETSYRLARD FTELEAHGRA TIDSLFLAQP LLRGRAFNLS
TQLQFENKRL RDDIDLFDYS KHKKIRLWTA GLSGNSQDRL LGGGQNGFSV AYGHGRLDMN
SMERRADRRT AGAVGRFDKL SVNAVRLQRV TDRLQLFTQL NAQWASGNLD SAEKFDIGGP
YGVRAFPAGT GRGVGDEGWQ ASAELRYSLA PGWQLSTFVD QGAVKFQKSP WTPESNHNRM
GGAGTGATWY GADHQVSLTA AWPLGQERDT VPKRTPRLWL QATRYF
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