| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5131 |
|---|
| Symbol | |
|---|
| ID | 5359695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 5282511 |
|---|
| End bp | 5284313 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640814177 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001350467 |
|---|
| Protein GI | 152984001 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.214339 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCCCCA CCCCACCAAG CGTCACGCGC AACCGCATCG ACTGGGCCGG CCTGGGCTGG
CTGTTCCTGT TCTTCTGGTT CTTCTCCGGC ATCACCCAAC TGCTCCTGCT GGCCTCCGGC
AACAGCGGCT TCTCCGGCTT CCGCAACGCC ATGGTGCTGA GCAGCATCTG GCTCGCGCCG
GTGCTGTTGT TCCCGCGCTG GACCAAGCCG CTGGCCGCGA TCATCGGGCT GGTGCTGTGG
GCCGCCTCGC TGGTCGGCCT GAGCTATTTC GGCATCTATC ACCAGGAATT TTCGCAAAGC
GTGATCTTCG TGATGTTCGA GTCGAACACC GCGGAAGCCA GCGAGTACTT CAGCCAGTAT
TTCAATCCCT GGATGACCCT CGGCCTGGTG CTCTACAGCC TGGTTGCGAT CCTGCTCTGG
CGGCGCCTGC GGCCGGTGTA CCTGCCGCGC TTCAGCGCCG CGCCGGTGGC CGTGCTGCTG
ATCGTCGCGA CCATCGGCTA TCCCTTCTAC AAGCAACTGG TAAGCCAGGG CCGTCCGTTC
GACCAGGCCC TGGACAAGGT CCAGGCGCGC ATGGAGCCGG CGGTGCCCTG GCAACTGCTG
ATCGGCTACC AGCAATATCG CCAGCAACTG GCCAGCATGC AGGCGCTGCT GCAGAAGAAT
GCCGCCCTGC CGCCGCTGAA GAACCTGGTC GACGCCAACG GCGACACCCC GCGCACCCTG
GTCCTGGTGA TCGGCGAGTC GACCTCGCGC AAACACATGA GCCTCTACGG CTACTCGCGT
GAAACCACCC CGCAGCTGGA TGCGCTGAAG GCCGCCAACC AGAACCTCAC GGTGTTCAAC
AACGTGGTGG CCTCGCGGCC GTACACCATC GAGGTGCTGC AGCAGGTGCT GACCTTCGCC
GACCAGGAAC ATCCGGATCG CTTCCTCACC GATCCGTCGC TGATGAACCT GATGAAGCAG
GCCGGCTACA AGACCTTCTG GATCACCAAC CAGCAGACCA TGACCAAGCG CAACACCATG
CTGACCACCT TCGCCCAGCA GACCGATGCG CAGTTCTACC TGAACAACCA GCGCAGCCAG
AACGCCAGCC AGCTCGACGG CGCGGTGCTG GCGCCCTTCG CCAAGGTGCT GGAAGACCCG
GCGCCGAAGA AGTTCATCGT GGTCCATCTG CTCGGCACCC ACATGAACTA CAAGTACCGC
TACCCCGAGG ACTACGCCCG CTTCGTCGAC CGCCAGGGCG CGCCGGCGGC GCTCAGCGAC
GACCAGGTGG CGGTCTACAA CAGCTACGAC AACGCCGTGC TGTACAACGA CTACGTGGTC
TCCAGCCTGA TCAAGGGCTT CGCCAACAGC GACCCGAATG GCTTCCTGGT CTATCTCTCC
GACCACGGTG AGGAAGTCTT CGACGAAGCC CCGCACGATC GCCTGGGACG CAACGAGGGC
GACCCGACCC GCGGCATGTA CACCGTGCCC TTCCTGGTCT GGACTTCCCC CAGCTGGCAG
CAGAGCCACC CCCGCGACCT GCAGGCGCTG GTCGACCGAC GCTACAGCAG CGAAGATCTG
ATCCACACCT GGTCCGACCT GGCCGGCCTC GGCTACGACC TCTTCGACCC GAGCAAGAGC
CTGGTCAGCA ACGACTTCCG GCAGGAAGTC CGCTGGATCG GCAACCCCTA CGCGCACAAT
GGCCTGCGCG ACTTCGACAA GCTGCCGCTG GACAAGGCCG CCACCGAACA GCAAGTGGCC
CAGGCCGGGC GCCCGGCACC GGCGACGCCG CGCGCGCCGG CCCGCCAGCC GAACGAAGGC
TGA
|
|---|
| Protein sequence | MSPTPPSVTR NRIDWAGLGW LFLFFWFFSG ITQLLLLASG NSGFSGFRNA MVLSSIWLAP
VLLFPRWTKP LAAIIGLVLW AASLVGLSYF GIYHQEFSQS VIFVMFESNT AEASEYFSQY
FNPWMTLGLV LYSLVAILLW RRLRPVYLPR FSAAPVAVLL IVATIGYPFY KQLVSQGRPF
DQALDKVQAR MEPAVPWQLL IGYQQYRQQL ASMQALLQKN AALPPLKNLV DANGDTPRTL
VLVIGESTSR KHMSLYGYSR ETTPQLDALK AANQNLTVFN NVVASRPYTI EVLQQVLTFA
DQEHPDRFLT DPSLMNLMKQ AGYKTFWITN QQTMTKRNTM LTTFAQQTDA QFYLNNQRSQ
NASQLDGAVL APFAKVLEDP APKKFIVVHL LGTHMNYKYR YPEDYARFVD RQGAPAALSD
DQVAVYNSYD NAVLYNDYVV SSLIKGFANS DPNGFLVYLS DHGEEVFDEA PHDRLGRNEG
DPTRGMYTVP FLVWTSPSWQ QSHPRDLQAL VDRRYSSEDL IHTWSDLAGL GYDLFDPSKS
LVSNDFRQEV RWIGNPYAHN GLRDFDKLPL DKAATEQQVA QAGRPAPATP RAPARQPNEG
|
|---|
| |