| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4974 |
|---|
| Symbol | secA |
|---|
| ID | 5358426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 5128840 |
|---|
| End bp | 5131590 |
|---|
| Gene Length | 2751 bp |
|---|
| Protein Length | 916 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640814020 |
|---|
| Product | preprotein translocase subunit SecA |
|---|
| Protein accession | YP_001350310 |
|---|
| Protein GI | 152984710 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
|---|
| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGCGC CTTTGTTGAA GAAACTCTTT GGAAGCAAGA ACGAGCGTGA TGTAAAGCGC
ATGGCCAAGG CTGTACAGGC CATCAATGCG CTCGAGCCCC AGATGGTGGC GCTCTCCGAC
GAGCAGTTGA AGGCGAAGAC GGCCGAGTTC CAGCAGCGCT ATGCCAAGGG CGAAACGCTC
GACCAGTTGT TGCCCGAAGC CTTCGCCGTG GTTCGCGAGG CCGGCAAGCG GGTGATGGGC
ATGCGTCACT TCGACGTCCA GCTGATCGGC GGCATGACCC TGCACGATGG CAAGATCGCG
GAAATGCGCA CCGGTGAGGG CAAGACCCTG GTGGGCACCC TGCCGGTGTA TCTCAACGCA
CTGTCCGGCA AGGGCGTGCA CGTGGTCACG GTGAACGACT ACCTGGCCCG CCGCGACGCC
AACTGGATGC GCCCGTTGTA CGAGTTCCTC GGCCTCAGCG TCGGTGTGGT CACCCCCTTC
CAGCCGCCGG AAGACAAGCG CGCGGCCTAC GCTGCGGACA TCACCTACGG CACCAACAAC
GAGTTCGGCT TCGACTACCT GCGTGACAAC ATGGCCTTCA GCCTGGACGA CAAGTTCCAG
CGCGAGCTGA ACTTCGCCGT GGTCGACGAA GTGGACTCGA TCCTCATCGA CGAGGCACGT
ACGCCGCTGA TCATCTCCGG CCAGGCCGAA GACAGCTCCG AGCTGTACAT CAAAATCAAC
AAGCTGATCC CGCGTCTCAA GCGCCAGGTC GAAGAGGTCG AGGGCAAGCC GAGCGAGGAA
GGCCACTACA GCATCGACGA GAAGACCCGC CAGGTCGAAC TCAACGAGCA GGGCCACCAG
TTCATCGAGG ACCTGCTGAG CCAGAACGGC CTGCTCGGCG AAGGCGAAAG CCTCTATTCG
GCGCACAACC TGAGCCTGCT GACCCACGTC TACGCGGCGC TGCGTGCGCA TACCCTGTTC
CACCGCAATG TCGAGTACAT CGTCCAGGGC GACCAGATCC TCCTGATCGA CGAGCACACC
GGGCGCACCA TGCCGGGTCG CCGCCTGTCC GAGGGCCTGC ACCAGGCGAT CGAGGCGAAG
GAAGGCCTGC CGATCCAGGC CGAGAGCCAG ACCCTGGCCT CGACCACCTT CCAGAACTAC
TTCCGCCTGT ACAACAAGCT GGCCGGCATG ACCGGCACCG CCGATACCGA GGCTTTCGAG
TTCCGCCAGA TCTACGGTCT GGACGTGGTG GTCATCCCGA CCCACCGACC GATCGCGCGC
AAGGACTTCA ACGACCTGGT CTACCTGACC CAGGAAGAGA AATACGCGGC GATCATCACC
GACATCAAGC AGTGCCAGGC CCTCGGCCGG CCGATCCTGG TCGGTACCGC GTCGATCGAG
AGTTCCGAAT ACGTTTCCAA GCTGCTGCAA CAGGCCGGCA TCGAGCACAA GGTGCTCAAC
GCCAAGTACC ACGAGAAGGA AGCCGAGATC ATCGCCCAGG CCGGTGCGCC GGGTTCGGTG
ACCATCGCCA CCAACATGGC CGGCCGTGGT ACCGACATCC TCCTCGGCGG CAACTGGGAA
GTCGAGGTCG CCGCTCTGGA GAACCCCACC GAGGAGCAGA TCGCCCAGAT CAAGGCCGAG
TGGCAGAAGC GCCACCAGCA GGTGATCGAA GCGGGCGGCC TGCATGTGAT CGCTTCCGAG
CGCCACGAGT CGCGCCGGAT CGACAACCAG TTGCGCGGCC GCGCCGGCCG CCAGGGCGAC
CCGGGTTCCA GCCGCTTCTA CCTGTCGCTG GAAGACAACC TGATGCGCAT CTTCGCCTCC
GACCGGGTGA AGAACTTCAT GAAGGCGCTG GGCATGCAGT CCGGCGAGGC GATCGAGCAC
CGCATGGTGA CCAACGCCAT CGAGAAGGCC CAGCGCAAGG TCGAAGGCCG CAACTTCGAT
ATCCGCAAGC AACTGCTGGA GTTCGACGAC GTCGCCAACG AGCAGCGCAA GGTGATCTAC
CACATGCGCA ACACCCTGCT GTCGGCCGAG GACGTGGGCG AGACCATCAA GGAGTTCCGC
GAGGAAACCC TCAACGCCAC CATCAACCAG CACATCCCGC CGCAGTCGCT GCCGGAGCAG
TGGGACGTCG AAGGCCTGGA AGCCGCGCTG TACAGCGATT TCGCCGTGCG CCTGCCGATC
CAGCAGTGGC TGGACGAAGA CGACAAGCTG TACGAGGAAA CCCTGCGCAG CAAGATCCTC
GAGCAGATCG TCGCCGCCTA CTACGAGAAG GAAGAGCTGG CCGGCGCCGA GGCCCTGCGC
GCCTTCGAGA AGCAGATGCT GCTGCGCGTG CTGGACGACC TGTGGAAGGA CCACCTGTCG
ACCATGGACC ACCTGCGCCA CGGTATCCAC CTGCGTGGCT ACGCGCAGAA GAACCCGAAG
CAGGAATACA AGCGCGAGTC CTTCACCCTG TTCCAGGAGT TGCTGGATTC GATCAAGCGC
GACACCATCC GCGTGCTGTC CCATGTCCAG GTCCGTCGCG AAGACCCGGC CGAAGAGGAA
GCCCGCCTGC GTCGCGAGGC GGAGGAACTG GCCAAGCGCA TGCAATTCCA GCATGCCGAG
GCACCGTCGA TGGAACAGGC GGTGGCCGGC GAGGACGAGG AGCTTCCCGA GGGCCCGGCT
CCGGTAGTGC CGCTCGAGCC GGTGCGCAAC GAGCAGAAGA TCGGCCGCAA CGAGCCTTGC
CCGTGCGGTT CCGGCAAGAA ATACAAGCAT TGCCACGGGC AGCTGGACTA A
|
|---|
| Protein sequence | MFAPLLKKLF GSKNERDVKR MAKAVQAINA LEPQMVALSD EQLKAKTAEF QQRYAKGETL
DQLLPEAFAV VREAGKRVMG MRHFDVQLIG GMTLHDGKIA EMRTGEGKTL VGTLPVYLNA
LSGKGVHVVT VNDYLARRDA NWMRPLYEFL GLSVGVVTPF QPPEDKRAAY AADITYGTNN
EFGFDYLRDN MAFSLDDKFQ RELNFAVVDE VDSILIDEAR TPLIISGQAE DSSELYIKIN
KLIPRLKRQV EEVEGKPSEE GHYSIDEKTR QVELNEQGHQ FIEDLLSQNG LLGEGESLYS
AHNLSLLTHV YAALRAHTLF HRNVEYIVQG DQILLIDEHT GRTMPGRRLS EGLHQAIEAK
EGLPIQAESQ TLASTTFQNY FRLYNKLAGM TGTADTEAFE FRQIYGLDVV VIPTHRPIAR
KDFNDLVYLT QEEKYAAIIT DIKQCQALGR PILVGTASIE SSEYVSKLLQ QAGIEHKVLN
AKYHEKEAEI IAQAGAPGSV TIATNMAGRG TDILLGGNWE VEVAALENPT EEQIAQIKAE
WQKRHQQVIE AGGLHVIASE RHESRRIDNQ LRGRAGRQGD PGSSRFYLSL EDNLMRIFAS
DRVKNFMKAL GMQSGEAIEH RMVTNAIEKA QRKVEGRNFD IRKQLLEFDD VANEQRKVIY
HMRNTLLSAE DVGETIKEFR EETLNATINQ HIPPQSLPEQ WDVEGLEAAL YSDFAVRLPI
QQWLDEDDKL YEETLRSKIL EQIVAAYYEK EELAGAEALR AFEKQMLLRV LDDLWKDHLS
TMDHLRHGIH LRGYAQKNPK QEYKRESFTL FQELLDSIKR DTIRVLSHVQ VRREDPAEEE
ARLRREAEEL AKRMQFQHAE APSMEQAVAG EDEELPEGPA PVVPLEPVRN EQKIGRNEPC
PCGSGKKYKH CHGQLD
|
|---|
| |