| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4871 |
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| Symbol | |
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| ID | 5356890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 5022694 |
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| End bp | 5023920 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640813917 |
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| Product | putative type II secretion system protein |
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| Protein accession | YP_001350207 |
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| Protein GI | 152989020 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0665602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGTGTG GGCTGGCCGG GTTGCTGGCG CTGTCGCTTG CGCAGCCGGC CTCGGCCCTG
CCGCAGGGCT GCCTGGAACT GCTGGCGCAG GCGCCGCAGG TCAGTGTCGC CCAGGGGCAG
CAGAATGACC TGCGCCTGGC GGTGCCGATC AAGCGCCTGG CCATCGGCGA TCCGCAGATC
GCCGACGTGC AGTTGCTGGA CCGCAGCAGC CTGCTGGTCA CCGGCAAGGA GCAGGGTTCC
ACCAGCCTGC TGATCTGGAC CGCCTGCAGC GCGGAACCAC TGCGCAGCCA GGTCGCGGTC
GAAGGGCGCG GCAGCGTCGA TACCGCAGCC GCGCCAGCGC TCGGGGCGGG GGGCGCGGAC
GAGTTGCCGA ACCAGGTGCA GACCGACATC CGCTTCGTCG AGGTCAGCCG CAGCAAGCTC
AAGCAGGCCA GCACATCGTT CGTCCGTCGT GGTGGCAATC TCTGGGTGCT CGGCGCGCCG
GGCAGCCTCG GCGACATCAA GGTGAACGCC GACGGCAGCG GCCTGGGCGG TACCTTCGGC
GCCGGCGCGT CGGGCTTCAA CCTGATCTTC GGCGGCGGCA AGTGGCTGAG CTTCATGAAC
GCCCTGGAGG GCAGCGGCTT CGCCTATACC CTGGCGCGTC CGAGCCTGGT GGCGATGAGC
GGGCAGAGCG CGTCGTTCCT GGCCGGTGGC GAGTTCCCGA TCCCGGTGCC GAACGGCACC
AACGACAACG TCACCATCGA ATACAAAGAA TTCGGCATCC GCCTGACCCT GACCCCGACG
GTGATGAACA ACCGGCGCAT CGCCCTCAAG GTGGCGCCGG AGGTCAGCGA GCTGGACTAC
AGCGCCGGCA TCCAGAGCGG CGGGGTGGCG GTGCCGGCCC TGCGGGTGCG GCGCACCGAC
ACCAGCGTGA TGCTGGCCGA TGGCGAAAGC TTCGTGATCA GCGGCCTGAC CAGCAGCAAC
TCGGTGAGCA ACGTCGACAA GTTTCCCTGG CTGGGCGACA TCCCGATCCT CGGCGCCTTC
TTCCGTTCGA CCAAGCTGGA CAAGGACGAC CGCGAGCTGC TGATGATCGT CACCCCGCAC
CTGGTCCAGC CGCTGGCCGC CGACGCGCAG TTGCCGGGCC TGCCCGGCGA AGGCCTGCGC
CATTACGACC CGGGCTTCTC GCGCCTGTAT TTCCTCGAGC GCGGCGAATA CGACGGCCAG
CAGAACGATA CCGGACTGTC GGACTAG
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| Protein sequence | MWCGLAGLLA LSLAQPASAL PQGCLELLAQ APQVSVAQGQ QNDLRLAVPI KRLAIGDPQI
ADVQLLDRSS LLVTGKEQGS TSLLIWTACS AEPLRSQVAV EGRGSVDTAA APALGAGGAD
ELPNQVQTDI RFVEVSRSKL KQASTSFVRR GGNLWVLGAP GSLGDIKVNA DGSGLGGTFG
AGASGFNLIF GGGKWLSFMN ALEGSGFAYT LARPSLVAMS GQSASFLAGG EFPIPVPNGT
NDNVTIEYKE FGIRLTLTPT VMNNRRIALK VAPEVSELDY SAGIQSGGVA VPALRVRRTD
TSVMLADGES FVISGLTSSN SVSNVDKFPW LGDIPILGAF FRSTKLDKDD RELLMIVTPH
LVQPLAADAQ LPGLPGEGLR HYDPGFSRLY FLERGEYDGQ QNDTGLSD
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