| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4849 |
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| Symbol | |
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| ID | 5355577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 4989971 |
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| End bp | 4993606 |
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| Gene Length | 3636 bp |
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| Protein Length | 1211 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640813895 |
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| Product | nuclease sbcCD subunit C |
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| Protein accession | YP_001350185 |
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| Protein GI | 152988436 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0713621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTC TCGCCATCCG CCTGAAGAAC CTCGCCTCCC TCGGCGGCGA GCAGGAAATC
GATTTCACCC GCGAGCCACT GTCCAGCGCC GGCCTGTTCG CCATCACCGG GCCGACCGGC
GCCGGCAAGA GCACCGTGCT GGACGCCCTG TGCCTGGCCC TGTTCGGCAG CACCCCACGC
CTGGAATCCA CCTCGACCAC CAGCAAGGTG CCCGACGGCC GGAACGAACT GTCCAGCAAC
GACGAGCGCA ACCTGCTGCG CCGCGGTTGC GCCAGCGGCT ACGCCGAAGT GGACTTCGTC
GGCATCGACG GCCGCCGCTA CCGCGCCCGC TGGGAAACCC GCCGCGCGCG GGACAAGGTC
GACGGCCAGT TGCAGGCCAG CCGGCAGAGC CTGCAGGACC TGGATAGCCG GCAGATGCTC
GCGGCGAACA AGAAGAGCGA ATTCCGCGAG CAGCTGGAAC AGAAGCTCGG CCTCAACTTC
GCCCAGTTCA CCCGCGCCGT GCTGCTGGCA CAGAGCGAAT TCAGCGCCTT TCTCAAGGCC
AACGACAACG ATCGCGGCGC GTTGCTGGAG AAACTCACCG ACACCGGCCT CTACAGCCAA
CTGAGCAAGG CCGCCTACCA GCGCGCCAGC CTGGCCGACG AACAGCGCAA GCAGCTGGAA
CAACGCCTGG AAGGCAGCCT GCCGCTCGCC GAACAGGCGC GGACCGAGCT GGAGTCGACG
CTGGCGAACC ACACCCAGGC CCGCCAGCAG GAGCAGCAGG CGCTGCAGCG CCTGGAAAAC
CAGCAGCAAT GGTTCCTGGA GGAGCGGCGC CTGGCCCTGT CTTGCGAGCA GGCCCAGCGT
CAACTCGCCG AGGCGCGGCA CGCCTGGGAC GGCCTGGCCG CCGAGCGGGA AACCCTGCAG
CAGCTGGAGC GCCTGGCCCC GGTTCGCGGC CTGCTGCAAC GCCTCGAACA GCTCGGACAG
GACCTGCTGC TTTCCCAGGA ACAACATCGC CAGCAAAGCC AGCGGCACAC CGCGGGCAGC
GAACGTCTGC TGCAGTTGCA GAGCCAGTTG CACGAGGCGC GGCAACGCCA GGCCGCCGCC
GAAAGCACTC TTCGCGAAGC CCAGGGGCCG CTGCGCGAGG CTTTCCAGCT GGAGGCCGAG
GCCAGCCGCC TCGAGCGGAC GCTATCCGAA CAGCAGACAC TCCATCGCCA GTCGAACGAG
CGCCATGCCC AGCAGTGCGA GGCAATCCAG CGCCTGGAGA GCGAACGGCA GCGCAGCGCC
GAAGAACAGA CGCAATTGCG GGCCGCGCTG CAGCAGAGCA GCGCCCTCGC CACCCTCGGC
GACGCCTGGC CGACCCAGCA GGGCCAGTTC GCCGCTTTCC TGCAACGGCG CCAGCGTTCG
GCCGAAAGCC GCGCCCTGCT GCCGGAGCTG GAGAACGCCC TGGCGCAGGC CGCTGAGCCA
CTCGGGCAGC TCCAGGAAAA GTGGGTTGCG CTGCATGGCA GCGACACGGA TGACCTCGCC
GCGCGACTGG ATGAGCTGCG CCAGCAGACC TCCGGGCTGG AGCAAAGCCA GGCGCTGTAC
AAGGAGTGGC AGCAAGGCCT GGGCCGGCGC GCCGACCTGG TCCGACGCTT GGCCGAACTC
GGCCAGCGCC TGGTCGCCCA GGAACAGCAG CTGCTAGAGC TGAAGCAGCA AGGCAGCCAA
TGCGCCGAAC AGGTGAAGGC GGCGGAGCAG GCGCTGCAAC TCACCCGCGA GTTGCTCCAG
CGCCAACGCC TGGCCCGCAG CGCCAGCGTG GAACAGTTGC GCGCCGGCCT GGTGGAGGGA
GAGGCCTGTC CCGTCTGCGG CAGCCAGGAG CATCCCTATC ACCACCCCGA GCGATTGCTC
GCGGCCCTCG GCGAAGCCGA CGACCAGGAA CAGGCCCGCG CCGAGCAGGC TCTCGAGCAG
CAGCGAGGAG CCCTCGGCGA TCTGCGCGAG CGTTACTCCA GTCAACGCGA GAAGCTCAAC
CAGAGCCGTC ATGAACAGCA GGAGTTGACC GAACAGTTGG CCGCACTCGA TCGCCAGTTG
GGGCAATGGA CCCTGCCGGG AGAATTGCTG CGCCTGGAAC CAGCCGCACA ACTGGAGTGG
CTGGGCACGC GCCTGGACGA GCTGGCGGAG CAGCGCCAGC ACAGCCAGCA GGACTTCGAC
CGGCTGATCG CCCGCCAGCG TCAGGCCCAG CAGTTGCGGC AGCAGCTGCG GGCGGCCGAG
GCGACGCTCC AGCAACGGCA GCAAGCGCTG CACGAACAGC AGCAGCGCTG CGAACACCTG
CGCCAGCAGG TCGAGGAGGA CGACCAGCAA CTGCGCCTGC TGCTTTCCGC CGAACACTGG
CAACGCTGGC AGGACGCTCC GGAGCCGACC TTCCAGGCGC TCGCCCAGGC GATCGAGCAA
CGTCGGCACC AGCAGGACCG CCTGCTGCAG GTCGAACAGC AGTTGCAGGA ACTGGAGCGG
CGCGGCGACG AGCTGCAGTG GCAACTGAAG CAGAACGACG AACAGCGCAG CCAGGCCCGC
CAGGCCGAGG AACAGACCCA GGCGGAACTG GCCGGGTTGC GCGGGCGCCT GGGCGCCCAT
CTCGGCCGGC ACACCCGCGC GCAGGACTGG CAGCAGGCAC TGGAAAACGC CGTGCAGGCG
GCGCAGGCCA CGGTCGAGAC GCTGCAGGCG CCGCTCGACA CGCTTCGCGA AGAACAGCTC
AGGCTCGGCG AAGCCCTCGA GCACCTGCAA CACCAGCAGT CGCGCCAGCA AGAGGAGCGG
CAGCGGCTAC AGGCCGACTG GCAGGCCTGG CGCGAAGGCC AGGAGAATCT CGATGACAGC
CGCCTCGACG CCCTGCTCGC CCTCCCCGAC GCGCAGGCCC GGCAATGGCG CGAACACCTG
CAGCAGCTGC AGGAAGAGAT CACCCGCCAG CGGACCCTGG AGGCGGAACG CCAGGAACAA
TTGCAGCAGC ATCGTCGACA ACGACCGGAG CTTGACCACG AGGCACTGGA AGACATCCTG
CGCCAGCAGC GCGAACGCCT GGCCGCCAGC GAACAGGCCT ATCTCGACGC CTACAGCCAG
TTGCAGGCCG ACAACCAGCG CCGCGAACAG AGCCAGGCGC TGCTCGCCGA ACTGGAGCAG
GCTCGCGCCG AGTTCCGCCG CTGGGGGCGC CTGAACGAGC TGATCGGTTC GTCCAGCGGC
GACAAGTTCC GCCGCATCGC CCAGGGCTAC AACCTCGACC TGCTGGTCCA GCACAGCAAC
GTGCAACTGC GCCAGCTCGC GCGGCGCTAT CGCCTGCAGC GCGGCGGCAG CGAACTGGGC
CTGCTGGTGG TGGATACGGA GATGGGCGAC GAGCTGCGTT CGGTCTACTC GCTGTCCGGT
GGCGAGACCT TCCTGATCTC CCTGGCCCTG GCGCTCGGCC TGGCCTCGAT GGCGTCGAGC
AAGCTGCGTA TCGAGTCGCT GTTCATCGAC GAAGGCTTCG GCAGCCTCGA CCCGGAGTCC
CTGCAACTGG CGATGGATGC CCTGGACAAC CTGCAGGCCC AGGGTCGCAA GGTAGCGGTG
ATCTCCCACG TACAGGAAAT GCACGAGCGT ATTCCGGTGC AGGTGCGGGT ACAGCGCGAA
GGCAACGGCA TGAGCAGCCT GAAGGTGGTC GGCTGA
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| Protein sequence | MKILAIRLKN LASLGGEQEI DFTREPLSSA GLFAITGPTG AGKSTVLDAL CLALFGSTPR
LESTSTTSKV PDGRNELSSN DERNLLRRGC ASGYAEVDFV GIDGRRYRAR WETRRARDKV
DGQLQASRQS LQDLDSRQML AANKKSEFRE QLEQKLGLNF AQFTRAVLLA QSEFSAFLKA
NDNDRGALLE KLTDTGLYSQ LSKAAYQRAS LADEQRKQLE QRLEGSLPLA EQARTELEST
LANHTQARQQ EQQALQRLEN QQQWFLEERR LALSCEQAQR QLAEARHAWD GLAAERETLQ
QLERLAPVRG LLQRLEQLGQ DLLLSQEQHR QQSQRHTAGS ERLLQLQSQL HEARQRQAAA
ESTLREAQGP LREAFQLEAE ASRLERTLSE QQTLHRQSNE RHAQQCEAIQ RLESERQRSA
EEQTQLRAAL QQSSALATLG DAWPTQQGQF AAFLQRRQRS AESRALLPEL ENALAQAAEP
LGQLQEKWVA LHGSDTDDLA ARLDELRQQT SGLEQSQALY KEWQQGLGRR ADLVRRLAEL
GQRLVAQEQQ LLELKQQGSQ CAEQVKAAEQ ALQLTRELLQ RQRLARSASV EQLRAGLVEG
EACPVCGSQE HPYHHPERLL AALGEADDQE QARAEQALEQ QRGALGDLRE RYSSQREKLN
QSRHEQQELT EQLAALDRQL GQWTLPGELL RLEPAAQLEW LGTRLDELAE QRQHSQQDFD
RLIARQRQAQ QLRQQLRAAE ATLQQRQQAL HEQQQRCEHL RQQVEEDDQQ LRLLLSAEHW
QRWQDAPEPT FQALAQAIEQ RRHQQDRLLQ VEQQLQELER RGDELQWQLK QNDEQRSQAR
QAEEQTQAEL AGLRGRLGAH LGRHTRAQDW QQALENAVQA AQATVETLQA PLDTLREEQL
RLGEALEHLQ HQQSRQQEER QRLQADWQAW REGQENLDDS RLDALLALPD AQARQWREHL
QQLQEEITRQ RTLEAERQEQ LQQHRRQRPE LDHEALEDIL RQQRERLAAS EQAYLDAYSQ
LQADNQRREQ SQALLAELEQ ARAEFRRWGR LNELIGSSSG DKFRRIAQGY NLDLLVQHSN
VQLRQLARRY RLQRGGSELG LLVVDTEMGD ELRSVYSLSG GETFLISLAL ALGLASMASS
KLRIESLFID EGFGSLDPES LQLAMDALDN LQAQGRKVAV ISHVQEMHER IPVQVRVQRE
GNGMSSLKVV G
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