Gene PSPA7_4823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_4823 
SymbolgspF1 
ID5355236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp4963196 
End bp4964410 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content72% 
IMG OID640813869 
Productputative type II secretion system protein 
Protein accessionYP_001350164 
Protein GI152985681 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID[TIGR02120] general secretion pathway protein F 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0274243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACCT TCCGCTACGA AGCCGCCGAC GCCCAGGGGC GGATCGAGAC CGGGACCCTG 
GAGGCGGACA GCCCGCGCGG TGCCCTCGGC CAGCTGCGCG CCCGCGGCCT GACTCCGCTG
GAGGTCCGCG AGCAGGCTGG TGGCGGGACC GGGCAAGGGG CGGGCGCGCT GTTCGCCCCA
CGCCTGTCCG ACGGCGACCT GGCCTGGGCC ACCCGCCAGC TGGCCAGCCT GCTGGCCGCC
AGCCTGCCGC TGGAAGCGGC GCTGAGCGCG ACCCTCGACC AGGCCGAGCG CAAGCATATT
GCACAGACCC TCGGCGCCGT GCGCAGCGAC GTGCGCGGCG GCATGCGCCT GGCCGACGCC
CTCGCCGCGC GGCCGCGCGA CTTTCCGGAA ATCTACCGGG CGCTGGTGGC GGCGGGCGAG
GAGTCCGGCG ACCTGGCCCA GGTAATGGAG CGCCTGGCCG ACTACATCGA GGAACGCAAC
GCCTTGCGTG GCAAGATCCT CACCGCGTTC ATCTATCCGG CGGTGGTCGG CGTGGTTTCC
ATCGGTATCG TCATCTTCCT CCTCGGCTAC GTGGTGCCGC AGGTGGTCAG CGCCTTTTCC
CAGGCGCGCC AGGACCTGCC GGCGCTGACC CGGGTGATGC TCCAGGCCAG TGACTTCGTG
CGCGCCTGGG GCTGGCTCTG CGCGGGAGCC CTCGGCGGTG GTTTCTGGGG CTGGCGCCTG
TACCTGCGCA ACCCGCAGGC GCGGCTCGAC TGGCATCGCC GGGTGCTGCG CCTGCCCCTG
ATCGGCCGCT TCGTGCTCGG GGTGAATACC GCGCGCTTCG CCTCCACCCT GGCGATCCTC
GGCAGCGCCG GCGTGCCGCT GCTGCGCGCG CTCGACGCGG CGCGCCAGAC CCTGGCCAAC
GACTGCCTGG CGTGGGCGGT GGAGGAGGCC ACCGCGCAGG TTCGCGAGGG CGTCTCGCTG
GCCTCGGCGC TGCGCGCGCG GCAGGTATTC CCGCCGATCC TCACCCACCT GATCGCCAGC
GGCGAGAAGA CCGGCGCGCT GCCACCGATG CTCGACCGCG CGGCGCAGAC CCTGTCGCGC
GACATCGAAC GCCGTGCCAT GGGCATGACC GCGTTGCTCG AACCGCTGAT GATCGTGGTC
ATGGGCGGCG TGGTGCTGAT GATCGTGATG GCGGTGCTGA TGCCGATCAT CGAGATGAAC
CAACTGGTCC AGTAG
 
Protein sequence
MQTFRYEAAD AQGRIETGTL EADSPRGALG QLRARGLTPL EVREQAGGGT GQGAGALFAP 
RLSDGDLAWA TRQLASLLAA SLPLEAALSA TLDQAERKHI AQTLGAVRSD VRGGMRLADA
LAARPRDFPE IYRALVAAGE ESGDLAQVME RLADYIEERN ALRGKILTAF IYPAVVGVVS
IGIVIFLLGY VVPQVVSAFS QARQDLPALT RVMLQASDFV RAWGWLCAGA LGGGFWGWRL
YLRNPQARLD WHRRVLRLPL IGRFVLGVNT ARFASTLAIL GSAGVPLLRA LDAARQTLAN
DCLAWAVEEA TAQVREGVSL ASALRARQVF PPILTHLIAS GEKTGALPPM LDRAAQTLSR
DIERRAMGMT ALLEPLMIVV MGGVVLMIVM AVLMPIIEMN QLVQ