Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4739 |
Symbol | |
ID | 5355886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 4872873 |
End bp | 4873625 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640813785 |
Product | proline utilization regulator |
Protein accession | YP_001350081 |
Protein GI | 152985669 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.284133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGACA CCCGCCTCAT CCGCCTGCCC GACCAGTCGC ATACCCACGC CCACGAACAT CATCAACTGG TGATGTCCCT GGCCGGGCGC GCCGAATTCG AGGTCAACGG CTGTGGCGGG GAAGTCTGCC GGATGCGCGC CTGCCTGGTG CCGGGCGAGG CGGGCCACGT ATTCGCCGGG GTGGGCGACA ACCGCATGCT GATCATCGAC CTGGGCGAGG ACAACCCGAC CCCGGATGAC CCCGACCTGC TCGCCCGCCT GTTCGAGGCG CCGCGCTACC CGACCCTGGA TGCCGACTTC CAGAACCTGC TCAGCTACGC CGGGGCAGAA CTGGCGCGCT ACGGCAGCGA CCCGCTGCTG ACCCGCGCCC TCGGCGGCGT GCTGATCCGT GCCCTGCACC TGCGCCTGTT CGGCGAGCAG CAACCGCTGC CGGCCAGCGG TCCGCTGGAC CTGGAGCGCC TGGATGCGCA CATCGTGCAG AACCTGGCGC GGCGCATCAC GGTCGCTGAA CTGGCCCAGG TCGCCTGTCT CAGCCCGAGC CATTTCCACG CGCAGTTCAA GGACAGCGTC GGCCTGACCC CGCACCAGTA CCTGCTCAAG GTCCGCCTGG ACTGCGCCGC GCGGCTGCTG CGGGAAAGCC GCCTGCCGCT GGTGCGGATC GCCGAGGAGT GCGGCTTCTC CAGCCAGAGC GCGCTGACCA CGGCGATGCG CCGCTACCTG GGGCTGACGC CGAAGTCGTT GCGCAAGGGC TGA
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Protein sequence | MFDTRLIRLP DQSHTHAHEH HQLVMSLAGR AEFEVNGCGG EVCRMRACLV PGEAGHVFAG VGDNRMLIID LGEDNPTPDD PDLLARLFEA PRYPTLDADF QNLLSYAGAE LARYGSDPLL TRALGGVLIR ALHLRLFGEQ QPLPASGPLD LERLDAHIVQ NLARRITVAE LAQVACLSPS HFHAQFKDSV GLTPHQYLLK VRLDCAARLL RESRLPLVRI AEECGFSSQS ALTTAMRRYL GLTPKSLRKG
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