| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4667 |
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| Symbol | cpbD |
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| ID | 5358042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 4794742 |
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| End bp | 4795908 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640813714 |
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| Product | chitin-binding protein CbpD precursor |
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| Protein accession | YP_001350011 |
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| Protein GI | 152986208 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3397] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.353514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACT ACTCAGCCAC CCTGGCACTC CTGCCACTCA CCCTCGCCCT GTTCCTGCCC
CAGGCGGCCA ACGCCCACGG CTCGATGGAA ACGCCGCCCA GCCGGGTCTA CGGCTGCTTC
CTCGAAGGTC CGGAGAATCC CAAGTCGGCC GCCTGCAAGG CCGCCGTCGC AGCCGGCGGC
ACCCAGGCGC TGTACGACTG GAATGGCGTC AACCAGGGCA ACGCCAACGG CAACCACCAG
GCGGTGGTCC CCGACGGCCA GCTCTGCGGC GCCGGCAAGG CGCTGTTCAA GGGCCTGAAC
CTGGCCCGCA GCGACTGGCC GAGCACCGCC ATCGCCCCGG ACGCCAGCGG CAACTTCCAG
TTCGTCTACA AGGCCAGCGC GCCACACGCG ACCCGCTACT TCGACTTCTA CATCACCAAG
GACGGCTACA ACCCGGAGAA ACCGCTGGCC TGGGGCGACC TGGAGCCGGC GCCGTTCTGT
TCGATCACCA GCGTCAAGCT GGAGAACGGC ACCTACCGGA TGAACTGCCC GCTGCCCCAG
GGCAAGACCG GCAAGCACGT GATCTACAAC GTCTGGCAGC GCTCGGACAG CCCGGAAGCC
TTCTACGCCT GCATCGACGT GAGCTTCAGC GGTGCCGTCG CCAACCCCTG GCAAGCGCTG
GGCAACCTGC GTGCGCAGCA GGACCTGCCG GCCGGCGCCA CCGTCACCCT GCGCCTGTTC
GACGCCCAGG GCCGCGACGC CCAGCGCCAC AGCCTGACCC TGGCCCAGGG CAGCAACGGC
GCCAAGCAAT GGCCGCTGGC GCTGGCGCAG AAGGTCAACC AGGACTCGAC CCTGGTCAAC
GTCGGCGTAC TGGATGCCTA CGGCGCGGTC AGCCCGGTGG CCAGTTCGCA GGACAACCAG
GTCTACGTGC GCCAGGCCGG CTATCGCTTC CAGGTCGACA TCGAACTGCC CAGCGAAGGC
GGCGAGCAAC CGGGCGGCGA CGGCAAGGTC GACTTCGACT ATCCGCAAGG CCTCCAGCAG
TACGACGCCG GCACCGTGGT ACGCGGCGCC GACGGCAAGC GCTACCAGTG CAAGCCCTAC
CCGAACTCCG GCTGGTGCAA GGGCTGGGAC CTGTACTACG CGCCGGGCAA GGGCATGGCC
TGGCAGGACG CCTGGACCCT GCTGTAA
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| Protein sequence | MKHYSATLAL LPLTLALFLP QAANAHGSME TPPSRVYGCF LEGPENPKSA ACKAAVAAGG
TQALYDWNGV NQGNANGNHQ AVVPDGQLCG AGKALFKGLN LARSDWPSTA IAPDASGNFQ
FVYKASAPHA TRYFDFYITK DGYNPEKPLA WGDLEPAPFC SITSVKLENG TYRMNCPLPQ
GKTGKHVIYN VWQRSDSPEA FYACIDVSFS GAVANPWQAL GNLRAQQDLP AGATVTLRLF
DAQGRDAQRH SLTLAQGSNG AKQWPLALAQ KVNQDSTLVN VGVLDAYGAV SPVASSQDNQ
VYVRQAGYRF QVDIELPSEG GEQPGGDGKV DFDYPQGLQQ YDAGTVVRGA DGKRYQCKPY
PNSGWCKGWD LYYAPGKGMA WQDAWTLL
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