| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4218 |
|---|
| Symbol | rrmA |
|---|
| ID | 5356055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 4357744 |
|---|
| End bp | 4358547 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640813268 |
|---|
| Product | rRNA methyltransferase |
|---|
| Protein accession | YP_001349572 |
|---|
| Protein GI | 152983938 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATCT GCCCGCTCTG CTCCGCCGCC CTGGGGACGG TCGACAACGG CGTCGCCTGC
CCCGCCGGGC ACCGCTTCGA CCGCGCCCGC CAGGGCTACC TGAACCTGCT GCCGGTGCAG
CACAAGAAAA GCCTCGACCC GGGCGACAAC GCCGCCATGG TCGAGGCCCG CCGCCAGTTC
CTCGGCGCCG GCCACTACGC GCCACTGGCC CGGCGCCTGG CCGAGCTGGC CGCCGAGCGC
GCGCCACGGC GCTGGCTGGA CATCGGCTGC GGCGAAGGCT ACTACAGCGC CCAGCTCGGC
GAAGCCCTGG GCGACGCCGA GGGCTACGCC CTGGACATCT CCCGCGAGGC GGTGAAGCGC
GCCTGCCGTC GCGCGCCACA GCTGACCTGG CTGGTGGCGA GCATGGCGCG GTTGCCGCTG
GCCGAGGCCA GTTGCGAGCT GATCGCCAGC GTATTCAGCC CGATCGACTG GAACGAGGCG
GTGCGCGTCC TCGCCCCCGG CGGCGGCGTG CTGCGCCTGG GCCCGGCCAG CGCGCACCTG
CTGGAGTTGC GCCAGCGCCT CTACGATGAC GTGCGCGACT ACGCCGACGA CAAGCACCTC
GCCGGCCTGC CCGCGCCGCT CAGCCTGCGC CATACGGAAA CCCTCAGCTT CCGTCTGGCC
CTGGACAGCT ACGAAGCGCG GGAAAACCTC CTGGCCATGA CCCCGCACGG CTGGCGGGTC
AACGCCGAGC GCCGCGCGCG GATCCTCGCC GAACCCTTCG AAGTCAGCGT GGCGGTGCGC
TACGATTGGC TGCAACGCGA CTGA
|
|---|
| Protein sequence | MLICPLCSAA LGTVDNGVAC PAGHRFDRAR QGYLNLLPVQ HKKSLDPGDN AAMVEARRQF
LGAGHYAPLA RRLAELAAER APRRWLDIGC GEGYYSAQLG EALGDAEGYA LDISREAVKR
ACRRAPQLTW LVASMARLPL AEASCELIAS VFSPIDWNEA VRVLAPGGGV LRLGPASAHL
LELRQRLYDD VRDYADDKHL AGLPAPLSLR HTETLSFRLA LDSYEARENL LAMTPHGWRV
NAERRARILA EPFEVSVAVR YDWLQRD
|
|---|
| |