Gene PSPA7_4217 details

Gene Information

• Locus tag: PSPA7_4217
• Symbol: dapE
• ID: 5358007
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 4356593
• End bp: 4357744
• Gene Length: 1152 bp
• Protein Length: 383 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640813267
• Product: succinyl-diaminopimelate desuccinylase
• Protein accession: YP_001349571
• Protein GI: 152983580
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
• TIGRFAM ID: [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGCCT CTTCGCCGAG TCTCTCGCCG ACCCTCGAAC TCGCCTGCGA GTTGATCCGC 
CGCCCCTCCG TCACCCCTGT CGACGCCGAT TGCCAGGCCC TGATGATGCG CCGCCTGGAA 
GCCGCCGGCT TCGCCCTGGA GCCGATGCGC ATCGAAGAGG TGGACAACTT CTGGGCGCGG 
CGCGGCGGCG ACGGCCCGGT GCTGTGCTTC GCCGGGCACA CCGACGTGGT CCCCACCGGG 
CCGGTGCAGG CCTGGCAGCA CCAACCCTTC GACGCCCTGA TCGACGAGCA GGGCATGCTC 
TGCGGGCGCG GCGCGGCGGA CATGAAAGGC AGCCTGGCGT CGATGATCGT CGCGGTCGAG 
CGCTTCGTCG CCGACCATCC CGGGCACAAG GGCGCCATCG CCTTCCTCAT CACCAGCGAC 
GAAGAAGGCC CGGCCCACCA TGGCACCAAG GCGGTGGTCG AGCGCCTCGC CGCGCGCGGC 
GAGCGCCTGG ACTGGTGCAT CGTCGGCGAA CCGTCGAGCA CCAGCCTGGT CGGCGACGTG 
GTGAAGAACG GCCGCCGCGG CTCCCTCGGC GCCAGGCTGA CCATCCGCGG CGTGCAGGGC 
CACGTGGCCT ACCCGCACCT GGCGAAGAAC CCGATCCACC TGGCTGCCCC GGCGCTGGCC 
GAACTGGCGG CGGAACACTG GGACGACGGC AACGCCTTCT TCCCGCCGAC CAGCTTCCAG 
ATTTCCAACC TGAACTCCGG GACCGGCGCC ACCAACGTCA TCCCCGGCGA ACTGAGCGCG 
CTGTTCAACT TCCGCTTCTC CACCGAATCC ACCGTCGAAG GCCTGCAGAA GCGCGTCGAG 
GCGATCCTCG ACAAGCACGG CCTGGACTGG CACGTCGAAT GGGCGCTGTC CGGCCTGCCG 
TTCCTCACCG AACCGGGCGA GCTGCTCGAC GCGGTGGCCG CCAGCATCAA GGCGGTCACC 
GGCCGCGAGA CCCGGCCCTC GACCAGCGGC GGTACTTCCG ACGGACGCTT CATCGCCACC 
ATGGGCACCC AGGTGGTCGA GCTCGGCCCG GTCAACGCCA CCATCCACCA GGTCAACGAG 
CGGGTCCTGG CCAGCGACCT GGAACTGCTC ACCGAGATCT ACTACCAGAC CCTGGTGAGG 
CTGCTCGCCT GA 

 

Protein sequence

MTASSPSLSP TLELACELIR RPSVTPVDAD CQALMMRRLE AAGFALEPMR IEEVDNFWAR 
RGGDGPVLCF AGHTDVVPTG PVQAWQHQPF DALIDEQGML CGRGAADMKG SLASMIVAVE 
RFVADHPGHK GAIAFLITSD EEGPAHHGTK AVVERLAARG ERLDWCIVGE PSSTSLVGDV 
VKNGRRGSLG ARLTIRGVQG HVAYPHLAKN PIHLAAPALA ELAAEHWDDG NAFFPPTSFQ 
ISNLNSGTGA TNVIPGELSA LFNFRFSTES TVEGLQKRVE AILDKHGLDW HVEWALSGLP 
FLTEPGELLD AVAASIKAVT GRETRPSTSG GTSDGRFIAT MGTQVVELGP VNATIHQVNE 
RVLASDLELL TEIYYQTLVR LLA