| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4196 |
|---|
| Symbol | dctA |
|---|
| ID | 5356225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 4333677 |
|---|
| End bp | 4334987 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640813246 |
|---|
| Product | C4-dicarboxylate transporter DctA |
|---|
| Protein accession | YP_001349550 |
|---|
| Protein GI | 152989555 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAC AACCCTTCTA CAAGAGCCTG TACGTGCAGG TTCTGGTCGC CATCGCCATC
GGTATCGCGC TAGGCCACTG GTATCCCGAG ACCGCGGTGG CGATGAAGCC GTTCGGCGAC
GGTTTCGTCA AACTGATCAA GATGGCCATC GCGCCGATCA TCTTCTGCAC CGTGGTCACC
GGCATCGCCG GCATGCAGAG CATGAAGTCG GTCGGCAAGA CCGGCGGCAT GGCCCTGCTG
TACTTCGAGA TCGTCTCCAC CGTGGCCCTG ATCATCGGCC TGGTGGTGGT CAACCTGGTC
CAGCCGGGCG CCGGCATGCA CGTCGATCCG AACACTCTCG ACACCAGCAA GATCGCCGCC
TACGCCGCCG CTGGCGAGAA GCAGAGCACC GTCGATTTCC TGATGAACGT CATCCCCGGC
ACCGTGGTCG GCGCGTTCGC CAACGGCGAC ATCCTCCAGG TCCTGTTCTT CTCCGTGCTC
TTCGGCTATG CCCTGCATCG CCTGGGTAGC TACGGCAAGC CGGTGTTCGA GTTCATCGAG
CGCGTCTCCC ACGTGATGTT CAACATCATC AACGTGATCA TGAAGGTCGC CCCGATCGGC
GCGTTCGGCG CCATGGCCTT CACCATCGGC GCCTATGGCG TGGGCTCGCT GGTGCAGCTC
GGCCAACTGA TGCTGTGCTT CTACATCACC TGCCTGCTGT TCGTGCTCAT CGTCCTCGGC
GGCATCGCCC GCGCCCATGG CTTCAGCATC CTGCGCTTCA TCAGGTACAT CCGCGAGGAG
CTGCTGATCG TGCTCGGCAC CTCGTCCTCC GAGTCGGCCC TGCCGCGGAT GATCGACAAG
ATGGAGAAGC TCGGCTGCAA CAAGTCGGTG GTCGGCCTGG TGATTCCCAC CGGCTACTCC
TTCAACCTCG ACGGCACTTC GATCTACCTG ACCATGGCCG CGGTGTTCAT CGCCCAGGCC
ACCGACACGC CGATGGACAT CACCCACCAG ATCACCCTGC TGCTGGTGCT GCTGATCGCT
TCCAAGGGGG CCGCCGGCGT CACCGGCAGC GGCTTCATCG TGCTCGCCGC GACCCTCTCC
GCCGTCGGCC ACCTGCCGGT CGCCGGCCTG GCGCTGATCC TCGGCATCGA CCGCTTCATG
TCCGAGGCCC GCGCGCTGAC CAACCTGGTC GGCAACGGCG TGGCCACGGT AGTGGTTTCC
AAGTGGTGCA AGCAGCTCGA CGAAGGCACC TTGCAGCGCG AACTGGCCGG CGAGGGCAAC
GCCTCGTCGC CCGCCAGCGA TATTCCGGTG GGCGGCCGCG AAGCGGTCTA A
|
|---|
| Protein sequence | MTKQPFYKSL YVQVLVAIAI GIALGHWYPE TAVAMKPFGD GFVKLIKMAI APIIFCTVVT
GIAGMQSMKS VGKTGGMALL YFEIVSTVAL IIGLVVVNLV QPGAGMHVDP NTLDTSKIAA
YAAAGEKQST VDFLMNVIPG TVVGAFANGD ILQVLFFSVL FGYALHRLGS YGKPVFEFIE
RVSHVMFNII NVIMKVAPIG AFGAMAFTIG AYGVGSLVQL GQLMLCFYIT CLLFVLIVLG
GIARAHGFSI LRFIRYIREE LLIVLGTSSS ESALPRMIDK MEKLGCNKSV VGLVIPTGYS
FNLDGTSIYL TMAAVFIAQA TDTPMDITHQ ITLLLVLLIA SKGAAGVTGS GFIVLAATLS
AVGHLPVAGL ALILGIDRFM SEARALTNLV GNGVATVVVS KWCKQLDEGT LQRELAGEGN
ASSPASDIPV GGREAV
|
|---|
| |