| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4144 |
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| Symbol | |
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| ID | 5355930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 4281420 |
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| End bp | 4282853 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640813194 |
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| Product | alkaline protease secretion protein AprF |
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| Protein accession | YP_001349498 |
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| Protein GI | 152983642 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0485622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATGC GACGCCTGAT TCCCTGGCTG TTGGGGGCCT TCCTGTTGTT GCTGCGCGAG
GACGCCTTCG CCCTCGGGCT GCTGGACGGC TACCATCTGG CGCTGGAGAA CGACCCGCAG
TTCCAGGGCG CGATCCAGGA GCACGAGGCC GGCAAGCAGT ACCGCGCGCT CGGCCGCGCG
GCCCTGCTGC CGCGCCTGGT GTACAGCTAC AACCGCGGGC GCAGCTGGTC CGACGTGACC
CAGACCTCCC GCGGCGATTT CAAGGAGGAG CGCGACTACG ACAGCTACGT CTCCACCCTC
AGCCTGCAGC AGCCGCTGTT CGACTACGAA GCCTTCAGCC GCTACCGCAA GGGCGTGGCC
CAGGCGCTGC TGTCCGACGC GCGCTTCCGC AGCCAGAGCC AGGAACTGCT GGTCCGGGTC
CTGGAAGCCT ATACCGGCGC GCTGCTGGCC CAGGACCAGA TCGACCTGGC GCGGGCGCAG
AAGCGTTCCT ATCGCGAGCA GTTCCAGCTC AACCAGCGCC AGTTCGAGCG CGGCAACGGC
ACGCGCACCG ACACCCTGGA GACCCAGGCC CGCTTCAACC TGGCCCAGGC GCAGGAGATC
GAGGCGCGCG ACAGCCAGGA TGCCGCCCTG CGCGAGCTGG AGCGGCTGGT CGGGGTGTCG
CTGGAGATTT CCGACCTGGC GCCGCTCGGC GAACGCTTCC AGGTGCGACC GCTGAGTCCC
GCCAGCTACA CCGCCTGGCG TGACCTGGCG CTGGCCGAGA ATCCCGAACT GGCCTCGCTG
CGCCACGCGG TGGACGTGGC CCGCCACGAG GTCGAGCAGA ACCGCGCCGA CTTCCTGCCG
CGCCTGGGCC TGTACGCCAG CACCGGCAAG TCCAAGTCCG GTTCGGAGAA CACCTACAAC
CAGCGCTACG AGACCGACAG CGTCGGCATC CAGCTGAGCA TCCCGCTGTA CTCCGGCGGC
GAGAGCCTGG CGGCGACGCG CCAGGCCACG CACCGCATGG AGAAGAGCCA CTACGACCTG
GACGACAAGG TCCGCGAGAC CCTCAATCAG GTGCGCAAGA TGTACAACCA GAGCAGCAGC
AGCGCGGCGA AGATCCGCGC CTACGAGATG ACCGTGGATT CGGCGCGGAC GCTGGTGATG
GCCACGCGCA AGAGCATCGC CGCCGGAGTG CGGGTCAACC TCGACCTGCT GAACGCCGAG
CAGGCGCTAT ACAGCGCGAT GAATGAGCTG TCCAGGGCCA AGTATGACTA CCTGACCGCC
TGGGCGCGCC TGCGCTTCTA CGCCGGGGTG CTCAGCGAAC AGGACCTGGA GCAGGTGGCG
GCGAACTTCG TCGCCGGCCA GGCGCCGCCC GCTCGCGACT GCGCGACGCG GGATTGTCCG
GCGCCGCTGC ATGCCCTGGC GCGGACGGAT GCGCAGCGGA GCCCGCTCAA TTGA
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| Protein sequence | MPMRRLIPWL LGAFLLLLRE DAFALGLLDG YHLALENDPQ FQGAIQEHEA GKQYRALGRA
ALLPRLVYSY NRGRSWSDVT QTSRGDFKEE RDYDSYVSTL SLQQPLFDYE AFSRYRKGVA
QALLSDARFR SQSQELLVRV LEAYTGALLA QDQIDLARAQ KRSYREQFQL NQRQFERGNG
TRTDTLETQA RFNLAQAQEI EARDSQDAAL RELERLVGVS LEISDLAPLG ERFQVRPLSP
ASYTAWRDLA LAENPELASL RHAVDVARHE VEQNRADFLP RLGLYASTGK SKSGSENTYN
QRYETDSVGI QLSIPLYSGG ESLAATRQAT HRMEKSHYDL DDKVRETLNQ VRKMYNQSSS
SAAKIRAYEM TVDSARTLVM ATRKSIAAGV RVNLDLLNAE QALYSAMNEL SRAKYDYLTA
WARLRFYAGV LSEQDLEQVA ANFVAGQAPP ARDCATRDCP APLHALARTD AQRSPLN
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