| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3989 |
|---|
| Symbol | |
|---|
| ID | 5355618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 4131116 |
|---|
| End bp | 4132207 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640813039 |
|---|
| Product | putative periplasmic spermidine/putrescine-binding protein |
|---|
| Protein accession | YP_001349343 |
|---|
| Protein GI | 152987446 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.15996 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACCC GCATCGCCTC CCTCACCCTC CTCGCCCTCG CTTGCGGCAA CGGCGCCGCC
TTCGCCGCCG ACACCCTGAA GATCTACAAC TGGTCCGAGT ACATCGCCCC GGAGACCGTG
GCGAACTTCG CCAGGGAAAC CGGCGTCCAG GCCACCTACG ACGTCTACGA CAGCAACGAG
ACCCTCGACG GCAAGCTGAT GACCGGCCAG TCCGGCTACG ACGTGGTGTT CCCGTCGAAC
CACTTCATGG CCAAGCAGAT CCAGGCCGGC GCCCTGAAGA AGCTCGACAA GAGCCAGCTG
CCCAACTGGA AGAACCTCAA CCCGGTGCTG CTCAAGGCCC TGGAGGTCAA CGACCCGGGC
AACCAGTACG GCTTCCCCTA CCTCTGGGGC ACCACCGGCA TCGGCTACAA CCCGGCGAAG
ATCAAGGCGG TGCTCGGCGA CGACGCGCCG CTGGACTCCT GGGACATCTT CTTCAAGCCC
GAGTACATGC AGAAGCTGAG CAAGTGCGGG GTGGCGGTGC TGGACAACGG CCCCGAGCTA
CTGCCCATCA CCCTCAACTA CCTCGGCCTG CCACACCACA GCCAGAAGGC CGACGACTAC
AAGCAGGCCC AGGCGGCGCT GCTGAAGGTG CGCCCGTACA TCCGCTACTT CCACTCCTCG
AAGTACGTCA GCGACCTGGC CAACGGCGAG ATCTGCATGG TGGTCGGTTT CTCCGGCGAC
ATCCTGCAGG CCGCGACCCG CGCCAAGGAG GCCAACAACG GCGTGGAAGT GCGCTACTCG
ACGCCGAAGG AAGGCTCGCC GCTGTGGTTC GACATGGTCT CGATGCCAAT CGACGCGCCC
GACGAGAAGG CCGGCTACGC CTTCATGAAC TACCTGCTGC GTCCCGAGGT GATGGCGGCG
ATCAGCAACC ACGTGCACTA CGCCAACGGC AACCTGGCCG CCGACCCGCT GGTGGACGCG
CAGATCAAGG CCGACCCGGC GATCTACCCG CCGCAGGAGA AGATGGCCAA GCTGTTCGCC
CTGGAATCCA TGCCGCAGAA GATCGACCGC GTGCGCACGC GTACCTGGAA CACGGTGAAG
ACCGGCAAGT GA
|
|---|
| Protein sequence | MKTRIASLTL LALACGNGAA FAADTLKIYN WSEYIAPETV ANFARETGVQ ATYDVYDSNE
TLDGKLMTGQ SGYDVVFPSN HFMAKQIQAG ALKKLDKSQL PNWKNLNPVL LKALEVNDPG
NQYGFPYLWG TTGIGYNPAK IKAVLGDDAP LDSWDIFFKP EYMQKLSKCG VAVLDNGPEL
LPITLNYLGL PHHSQKADDY KQAQAALLKV RPYIRYFHSS KYVSDLANGE ICMVVGFSGD
ILQAATRAKE ANNGVEVRYS TPKEGSPLWF DMVSMPIDAP DEKAGYAFMN YLLRPEVMAA
ISNHVHYANG NLAADPLVDA QIKADPAIYP PQEKMAKLFA LESMPQKIDR VRTRTWNTVK
TGK
|
|---|
| |