Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3929 |
Symbol | |
ID | 5355335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 4067191 |
End bp | 4068282 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640812979 |
Product | putative periplasmic spermidine/putrescine-binding protein |
Protein accession | YP_001349283 |
Protein GI | 152984615 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATCGA CTCGCAAGCT GCTGGCCGGC CTCGTGCTGG CCGCTTCCGC CGGGCTGGTC CAGGCCGCGC CGGAAGTACG GATCTACAAC TGGTTCGACT ACATCGCCCC GGACACCCTG AAGAACTTCC AGGCGCAGAC CGGCATCGCG CCGAAGTACG ATGTCTACGA CAGTAACGAG GTGCTCGAGG CCAAGCTGCT GTCCGGGCAC TCCGGCTACG ACCTGGTGGT GCCCAGCGAC AGCTTCCTGC CCAACTACCT GAAGGCCGAG GTGTTCCAGC CGCTCGACAA GAGCAAGCTG CCGAACTGGA AGAACCTCAA CCCGGCACTG CTCAAGGTGC TTGCCGGCAA GGACCCCGGC AACCGCTACG TGATGCCCTA CATGTGGGGC ACCAACGGCA TCGCCTACAA CCTCGACAAG GTCCGCGCGG TGCTCGGCGA CGATGCGCCG CTGGATTCCT GGGACCTGGT GTTCAAGCCG GAGAACCTGG CAAAGCTGCA ACAGTGCGGC GTGGCCTTCC TCGACTCGCC CACCGAGGTG ATCCCCGAGG TGCTGCACTA TCTCGGCCTG TCGCCCAACA GCCACCAGCC GGAAGACTAC CGCCGAGCCG AGGAGCACCT GGCGAAGCTG CGCCCGTACA TCACCTACTT CAGTTCCTCG AAGTTCGTCA GCGACCTGGC CAACGGCAAC GTCTGCGTGG CCATCGCCTG GTCCGGCGGA GCGATGCAGG CGGCCAACCG GGCCAGGGAA GCGAAGAACG GCATACGCAT CGAGTACCGC ATCCCGAAGG AGGGCGCCGC GGCCTGGTTC GACGTGCTGG CGATCCCGCG CGATGCGAAG AACGTCGAGC AGGCGCACGC CTTCCTCGAC TACCTGCTGC GCCCGGAGGT GGTGGCGCCG ATCTCCGACT ACGTGGCCTA CGCCAACCCG AACAAGGCGG CGGACGGTTT GATCTCGGCG GAGTTGCGCG ACAATCCGAA CGTCTACCCG CCGGAAGAAG TGCAGGCCAG GCTGTATACG GTGGAAATGC TGCCGCCGAA GCTGGAGCGG CTGCGCACGC GGACCTGGAG CAAGATCAAG ACCGGCAAGT GA
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Protein sequence | MQSTRKLLAG LVLAASAGLV QAAPEVRIYN WFDYIAPDTL KNFQAQTGIA PKYDVYDSNE VLEAKLLSGH SGYDLVVPSD SFLPNYLKAE VFQPLDKSKL PNWKNLNPAL LKVLAGKDPG NRYVMPYMWG TNGIAYNLDK VRAVLGDDAP LDSWDLVFKP ENLAKLQQCG VAFLDSPTEV IPEVLHYLGL SPNSHQPEDY RRAEEHLAKL RPYITYFSSS KFVSDLANGN VCVAIAWSGG AMQAANRARE AKNGIRIEYR IPKEGAAAWF DVLAIPRDAK NVEQAHAFLD YLLRPEVVAP ISDYVAYANP NKAADGLISA ELRDNPNVYP PEEVQARLYT VEMLPPKLER LRTRTWSKIK TGK
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