Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3897 |
Symbol | lasI |
ID | 5357131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 4031732 |
End bp | 4032337 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640812947 |
Product | autoinducer synthesis protein LasI |
Protein accession | YP_001349251 |
Protein GI | 152986918 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [T] Signal transduction mechanisms |
COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.156305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGTAC AAATTGGTCG GCGTGAAGAG TTCGATAAAA AACTGCTGGG CGAGATGCAC AAGTTGCGTG CGCAAGTGTT CAAGGAGCGC AAGGGTTGGG ACGTTAGTGT CATCGACGAG ATGGAGATCG ATGGTTATGA CGCGCTAAGT CCTTATTACA TGTTGATCCA GGAAGACACT CCCGAAGCCC AGGTTTTCGG TTGCTGGCGA ATTCTCGATA CCACCGGCCC CTACATGCTC AAGAACACTT TCCCGGAGCT GCTGCATGGC AAGGAAGCAC CATGTTCGCC GCATATCTGG GAGCTGAGCC GCTTCGCCAT CAACTCCGGG CAGAAAGGTT CGCTGGGCTT TTCCGACTGT ACCCTGGAGG CGATGCGCGC GCTGGCCCGC TACAGCCTGC AGAACGACAT CCAGACCCTG GTGACCGTGA CCACCGTAGG CGTGGAGAAG ATGATGATCC GTGCCGGCCT GGACGTCTCG CGCTTCGGCC CGCATCTGAA GATCGGCATC GAGCGCGCCG TGGCCCTGCG TATCGAGCTC AACGCCAAGA CCCAGATAGC GCTGTACGGA GGGGTGCTGG TGGAACAGCA ACTGGCGGTT TCATGA
|
Protein sequence | MIVQIGRREE FDKKLLGEMH KLRAQVFKER KGWDVSVIDE MEIDGYDALS PYYMLIQEDT PEAQVFGCWR ILDTTGPYML KNTFPELLHG KEAPCSPHIW ELSRFAINSG QKGSLGFSDC TLEAMRALAR YSLQNDIQTL VTVTTVGVEK MMIRAGLDVS RFGPHLKIGI ERAVALRIEL NAKTQIALYG GVLVEQQLAV S
|
| |