| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3879 |
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| Symbol | fliR |
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| ID | 5354052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 4012541 |
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| End bp | 4013317 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640812929 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_001349233 |
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| Protein GI | 152987229 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGAAC TGAGCAACGC GCAGATCGGC GGCTGGATCG CCAGCTTCGT GCTGCCGCTG
TTCCGGGTCG CGGCGCTGCT GATGACCATG CCGGTGATCG GCACCCAACT GGTGCCGGTG
CGGGTGCGCC TGTACCTGGC GCTGGGGATC TGCGTGGTGC TGGTGCCGAA CCTGCCGCCG
ATGCCGCAGG TGGACGCGCT GAGCGTGAAA TCCATGCTGC TGATCGGCGA GCAGATCCTG
GTCGGTGCCT TGCTCGGCTT CTCCCTGCAG TTGCTGTTCC ACGCCTTCGT GATCGCCGGA
CAGATCATTT CCATGCAGAT GGGCCTGGGC TTCGCCTCCA TGGTCGACCC GGCCAACGGC
GTCTCGGTGC CGGTGCTCGG GCAGTTCTTC ACCATGCTGG TGACCCTGCT GTTCCTGGCG
ATGAACGGTC ACCTGGTGGT GTTCGAGGTG ATCGCCGAGA GCTTCGTCAC CCTGCCGGTG
GGCGAGGGCC TGAGCGGCAA CCACTTCTGG GTCATCGCCG GCAAGCTCGG CTGGGTGATG
GGCGCGGCGC TGCTGCTGGC GCTGCCGGCG ATCACCGCGC TGCTGGTGGT TAACCTGGCG
TTCGGCGCGA TGACCCGCGC GGCGCCGCAG CTGAACATTT TCTCCATCGG CTTCCCGCTT
ACCCTGGTGC TGGGCCTGGG AATCCTCTGG ATCGGCACCG CCGACCTGCT CGGCCAGTAC
CAGGTGCTGG CCGGCGAAGC CCTGCAATTC CTCCGTGAAC TGGTGCGGGC GAGGTAG
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| Protein sequence | MLELSNAQIG GWIASFVLPL FRVAALLMTM PVIGTQLVPV RVRLYLALGI CVVLVPNLPP
MPQVDALSVK SMLLIGEQIL VGALLGFSLQ LLFHAFVIAG QIISMQMGLG FASMVDPANG
VSVPVLGQFF TMLVTLLFLA MNGHLVVFEV IAESFVTLPV GEGLSGNHFW VIAGKLGWVM
GAALLLALPA ITALLVVNLA FGAMTRAAPQ LNIFSIGFPL TLVLGLGILW IGTADLLGQY
QVLAGEALQF LRELVRAR
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