| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3872 |
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| Symbol | fliA |
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| ID | 5356342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 4003341 |
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| End bp | 4004060 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640812922 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_001349226 |
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| Protein GI | 152986686 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.107932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAGCA AGGCGCAAGC GCAGAACTCC CAGGAGCAAC TGATCCAGCG TTACGCACCA
CTGGTCAAGC GCATCGCCTA CCACCTGCTC GGCCGCCTGC CGGCCAGCGT GCAGGTGGAG
GACCTCATGC AGGCCGGCAT GATCGGCCTG CTCGAGGCCG CGAAGAAATA CGATGCCGGC
AAGGGCGCCA GCTTCGAGAC CTATGCCGGC ATCCGCATCC GCGGCGCCAT GCTCGACGAG
GTCCGCAAGG GCGACTGGGC GCCGCGCTCG GTGCACCGCA ACACCCGCAT GGTGACCGAC
GCGATCCGCG CGATCGAGGC GAGAACCGGC CGCGACGCTA AAGATCACGA GGTTGCTGCC
GAACTCCAAT TGAGCCTCGA AGATTACTAC GGCATCCTCA GCGACACGCA GGGCAGCCGC
CTGTACAGCT TCGACGACCT GTTGCAGGAC GGCGAACATG GATTGCCCGA AGATACCAGC
CTCAGTCACA ACGAGCCGAT CCACGGCCTG CTCGACGAAC GTTTCCAGGC GGCCCTGGCG
GATGCCATCG CCAAGCTGCC GGAACGCGAG CGCCTGGTCC TGGCGTTGTA TTACGACGAG
GAGCTCAATC TCAAGGAGAT CGGCGAGGTG CTGGGCGTCA GCGAATCGCG GGTCAGCCAG
TTGCACAGCC AGTGCGCCGC GCGGTTGCGC GCGCGCCTGG CGGATTGGCG GTCGGCCTGA
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| Protein sequence | MYSKAQAQNS QEQLIQRYAP LVKRIAYHLL GRLPASVQVE DLMQAGMIGL LEAAKKYDAG
KGASFETYAG IRIRGAMLDE VRKGDWAPRS VHRNTRMVTD AIRAIEARTG RDAKDHEVAA
ELQLSLEDYY GILSDTQGSR LYSFDDLLQD GEHGLPEDTS LSHNEPIHGL LDERFQAALA
DAIAKLPERE RLVLALYYDE ELNLKEIGEV LGVSESRVSQ LHSQCAARLR ARLADWRSA
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