| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3813 |
|---|
| Symbol | |
|---|
| ID | 5355975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 3950822 |
|---|
| End bp | 3951601 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640812863 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_001349167 |
|---|
| Protein GI | 152988462 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.12567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC AGTTGCAACA CATCAGGAAG CCGCCGCGCA CCGGCAAGCC TGCCCGCAGC
GGTACCCAGG ACGAGATCGT CTACGCCCAC ATCTTCGACG CCATCCTCGA ACAACGCCTG
GCCCCCGGCA CCAAGCTGAG CGAGGAAGCG CTCGGCGAGA TCTTCGGCGT CAGCCGCACC
ATCATTCGCC GCGCCCTGTC GCGCCTGGCC CACGAGCAGG TGGTGCTGCT GCGGCCGAAC
CGCGGCGCGG TAGTCGCCAG CCCGAGCATC GACGAGGCCC GGCAGATCCT CTTCGCCCGC
CGCACCGTCG AGCGCGCCAT CACCGAACTG GCCACCGACA ACGCCACCAC CGAGCGCCTG
GCCGAATTGC GCGAGATGGT GGTGCAGGAA CAGTCCAGCT TCGCCCGTGG CGACCGTGGC
GCCGGCATCC GCCTGTCCGG CGAGTTCCAC CTGAAGCTCG CCGAGATGGC GCGCAATGCT
CCTCTGGTGA GCTTCCAGCG CAGCCTGGTG TCGCAGACCT CGCTGATCAT CGCCCAGTAC
GAAAGCGGCG GCCGCTCGCA CTGCTCGTTC GACGAGCACA ACGAGATCCT CGACGCCATC
GAGAGAGGCG ACAAGGAGCG CGCGGTGACC CTGATGATGC ATCACATGGA GCACATCGAC
AGCAAGCTCA ACCTGGAGAG CGACAACGCG TCCGGTGACC TGCACGCGGT GTTCTCGCAT
CTGCTCGGGA GCAAGAAGAA GCCGCGCCGG GCCAAGGCCG ACAGCGACTC GGCGGCCTGA
|
|---|
| Protein sequence | MTDQLQHIRK PPRTGKPARS GTQDEIVYAH IFDAILEQRL APGTKLSEEA LGEIFGVSRT
IIRRALSRLA HEQVVLLRPN RGAVVASPSI DEARQILFAR RTVERAITEL ATDNATTERL
AELREMVVQE QSSFARGDRG AGIRLSGEFH LKLAEMARNA PLVSFQRSLV SQTSLIIAQY
ESGGRSHCSF DEHNEILDAI ERGDKERAVT LMMHHMEHID SKLNLESDNA SGDLHAVFSH
LLGSKKKPRR AKADSDSAA
|
|---|
| |