Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3687 |
Symbol | lpdA1 |
ID | 5356551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3818755 |
End bp | 3820191 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640812737 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001349041 |
Protein GI | 152987636 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.338346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGA AATTCGACGT GGTAGTGATT GGTGCCGGCC CCGGCGGCTA CGTTGCCGCC ATCCGCGCTG CCCAGTTGGG CCTGAAGACC GCCTGCATCG AGAAGTACAT CGGCAAGGAA GGCAAGGTGG CGCTCGGCGG CACCTGCCTG AACGTTGGCT GCATCCCGTC CAAGGCGCTG CTGGACAGCT CCTACAAGTA CCACGAGGCC AAAGAGGCCT TCAAAGTCCA TGGCATCGAA GCCAAGGGCG TCACCATCGA CGTTCCGGCG ATGGTTGCGC GCAAGGCCAA CATCGTCAAG AACCTGACCG GCGGCATCGC CACCCTGTTC AAGGCCAACG GCGTGACTTC CTTCGAAGGC CACGGCAAGC TGCTGGCCAA CAAGCAGGTG GAAGTGACCG GCCTGGACGG CAAGACCCAG GTCCTGGAAG CCGAGAACGT GATCATCGCC TCCGGCTCCC GTCCGGTGGA GATCCCGCCG GCCCCGCTGA CCGACGACAT CATCGTCGAC TCCACCGGCG CCCTGGAATT CCAGGCCGTG CCGAAGAAGC TGGGCGTGAT CGGCGCCGGC GTCATCGGTC TGGAGCTGGG TTCGGTATGG GCCCGCCTGG GTGCCGAGGT GACCGTCCTG GAAGCGCTGG ACAAGTTCCT CCCGGCCGCC GACGAGCAGA TCGCCAAGGA AGCCCTGAAG GTCCTGACCA AGCAAGGCCT GAACATCCGT CTGGGCGCCC GCGTGACCGC TTCGGAAGTG AAGAAGAAGC AGGTCACCGT GACCTTCACC GACGCCAACG GCGAGCAGAA GGAAACCTTC GACAAACTGA TCGTCGCGGT CGGCCGTCGC CCGGTGACCA CCGACCTGCT GGCCGCCGAC AGCGGCGTGA CCCTCGACGA GCGTGGCTTC ATCTACGTCG ACGACCACTG CAAGACCAGC GTTCCGGGCG TCTTCGCCAT CGGTGACGTG GTTCGCGGCG CGATGCTCGC GCACAAGGCC TCGGAAGAGG GCGTGATGGT CGCCGAGCGC ATCGCCGGCC ACAAGGCGCA GATGAACTAC GACCTGATTC CGTCGGTCAT CTACACCCAC CCGGAAATCG CCTGGGTCGG CAAGACCGAG CAGACCCTCA AGGCCGAGGG CGTCGAAGTC AACGTCGGCA CCTTCCCGTT CGCCGCCAGC GGTCGTGCGA TGGCTGCCAA CGACACCACC GGCCTGGTCA AGGTCATCGC CGATGCGAAG ACCGACCGCG TGCTGGGCGT CCACGTGATC GGCCCGAGCG CCGCCGAACT GGTGCAGCAG GGCGCGATCG GCATGGAGTT CGGCACCAGC GCCGAGGACC TGGGCATGAT GGTCTTCTCC CACCCGACCC TGTCCGAAGC CCTGCACGAA GCCGCCCTGG CGGTGAATGG CCACGCCATC CACATCGCCA ACCGCAAGAA GCGCTGA
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Protein sequence | MSQKFDVVVI GAGPGGYVAA IRAAQLGLKT ACIEKYIGKE GKVALGGTCL NVGCIPSKAL LDSSYKYHEA KEAFKVHGIE AKGVTIDVPA MVARKANIVK NLTGGIATLF KANGVTSFEG HGKLLANKQV EVTGLDGKTQ VLEAENVIIA SGSRPVEIPP APLTDDIIVD STGALEFQAV PKKLGVIGAG VIGLELGSVW ARLGAEVTVL EALDKFLPAA DEQIAKEALK VLTKQGLNIR LGARVTASEV KKKQVTVTFT DANGEQKETF DKLIVAVGRR PVTTDLLAAD SGVTLDERGF IYVDDHCKTS VPGVFAIGDV VRGAMLAHKA SEEGVMVAER IAGHKAQMNY DLIPSVIYTH PEIAWVGKTE QTLKAEGVEV NVGTFPFAAS GRAMAANDTT GLVKVIADAK TDRVLGVHVI GPSAAELVQQ GAIGMEFGTS AEDLGMMVFS HPTLSEALHE AALAVNGHAI HIANRKKR
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