Gene PSPA7_3687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_3687 
SymbollpdA1 
ID5356551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp3818755 
End bp3820191 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content65% 
IMG OID640812737 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_001349041 
Protein GI152987636 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.338346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGA AATTCGACGT GGTAGTGATT GGTGCCGGCC CCGGCGGCTA CGTTGCCGCC 
ATCCGCGCTG CCCAGTTGGG CCTGAAGACC GCCTGCATCG AGAAGTACAT CGGCAAGGAA
GGCAAGGTGG CGCTCGGCGG CACCTGCCTG AACGTTGGCT GCATCCCGTC CAAGGCGCTG
CTGGACAGCT CCTACAAGTA CCACGAGGCC AAAGAGGCCT TCAAAGTCCA TGGCATCGAA
GCCAAGGGCG TCACCATCGA CGTTCCGGCG ATGGTTGCGC GCAAGGCCAA CATCGTCAAG
AACCTGACCG GCGGCATCGC CACCCTGTTC AAGGCCAACG GCGTGACTTC CTTCGAAGGC
CACGGCAAGC TGCTGGCCAA CAAGCAGGTG GAAGTGACCG GCCTGGACGG CAAGACCCAG
GTCCTGGAAG CCGAGAACGT GATCATCGCC TCCGGCTCCC GTCCGGTGGA GATCCCGCCG
GCCCCGCTGA CCGACGACAT CATCGTCGAC TCCACCGGCG CCCTGGAATT CCAGGCCGTG
CCGAAGAAGC TGGGCGTGAT CGGCGCCGGC GTCATCGGTC TGGAGCTGGG TTCGGTATGG
GCCCGCCTGG GTGCCGAGGT GACCGTCCTG GAAGCGCTGG ACAAGTTCCT CCCGGCCGCC
GACGAGCAGA TCGCCAAGGA AGCCCTGAAG GTCCTGACCA AGCAAGGCCT GAACATCCGT
CTGGGCGCCC GCGTGACCGC TTCGGAAGTG AAGAAGAAGC AGGTCACCGT GACCTTCACC
GACGCCAACG GCGAGCAGAA GGAAACCTTC GACAAACTGA TCGTCGCGGT CGGCCGTCGC
CCGGTGACCA CCGACCTGCT GGCCGCCGAC AGCGGCGTGA CCCTCGACGA GCGTGGCTTC
ATCTACGTCG ACGACCACTG CAAGACCAGC GTTCCGGGCG TCTTCGCCAT CGGTGACGTG
GTTCGCGGCG CGATGCTCGC GCACAAGGCC TCGGAAGAGG GCGTGATGGT CGCCGAGCGC
ATCGCCGGCC ACAAGGCGCA GATGAACTAC GACCTGATTC CGTCGGTCAT CTACACCCAC
CCGGAAATCG CCTGGGTCGG CAAGACCGAG CAGACCCTCA AGGCCGAGGG CGTCGAAGTC
AACGTCGGCA CCTTCCCGTT CGCCGCCAGC GGTCGTGCGA TGGCTGCCAA CGACACCACC
GGCCTGGTCA AGGTCATCGC CGATGCGAAG ACCGACCGCG TGCTGGGCGT CCACGTGATC
GGCCCGAGCG CCGCCGAACT GGTGCAGCAG GGCGCGATCG GCATGGAGTT CGGCACCAGC
GCCGAGGACC TGGGCATGAT GGTCTTCTCC CACCCGACCC TGTCCGAAGC CCTGCACGAA
GCCGCCCTGG CGGTGAATGG CCACGCCATC CACATCGCCA ACCGCAAGAA GCGCTGA
 
Protein sequence
MSQKFDVVVI GAGPGGYVAA IRAAQLGLKT ACIEKYIGKE GKVALGGTCL NVGCIPSKAL 
LDSSYKYHEA KEAFKVHGIE AKGVTIDVPA MVARKANIVK NLTGGIATLF KANGVTSFEG
HGKLLANKQV EVTGLDGKTQ VLEAENVIIA SGSRPVEIPP APLTDDIIVD STGALEFQAV
PKKLGVIGAG VIGLELGSVW ARLGAEVTVL EALDKFLPAA DEQIAKEALK VLTKQGLNIR
LGARVTASEV KKKQVTVTFT DANGEQKETF DKLIVAVGRR PVTTDLLAAD SGVTLDERGF
IYVDDHCKTS VPGVFAIGDV VRGAMLAHKA SEEGVMVAER IAGHKAQMNY DLIPSVIYTH
PEIAWVGKTE QTLKAEGVEV NVGTFPFAAS GRAMAANDTT GLVKVIADAK TDRVLGVHVI
GPSAAELVQQ GAIGMEFGTS AEDLGMMVFS HPTLSEALHE AALAVNGHAI HIANRKKR