Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3614 |
Symbol | |
ID | 5354058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3742921 |
End bp | 3744396 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640812664 |
Product | hypothetical protein |
Protein accession | YP_001348968 |
Protein GI | 152987994 |
COG category | [S] Function unknown |
COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.227382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCACGA ATGCTGCACA GCAAAACCGG AACGAGAACG GTGAGTACAA CATTCTCGAC AGCATCATTG CCGAAACTCG CTTGAGCCCG GACGACGAGG CCTACGACAT TGCCAGGCGT GGTGTGTCGG CCTTCATTGA GGAACTGCTC AAGCCGCAGA ACGAAGGCGA GCCGGTGAAG AAGGCGATGG TAGATCGGAT GATCGCCGAG ATCGATGCCA AGCTCGGCAG TCAGATGGAC GAGATCCTCC ATCATCCGGA CTTCCAGGCC CTGGAGTCGG CCTGGCGCGG CCTGCAATTG CTGGTCGACC GCACGAACTT CCGCGAGAAC ATCAGGATCG AGATCCTCAG CGTATCCAAG GAGGACTTGC TGGACGATTT CGAGGACTCG CCGGAGGTAA TGCAATCCGG CCTGTACAAG CATATCTATA CCGCAGAATA TGGACAGTTC GGTGGCCAGC CGGTCGGCGC GATCATCGCC AACTACTACC TGTCGCCCAG CTCGCCGGAC GTCAAGCTGA TGCAGTACGT CTCCAGCGTG GCCTGCATGG CCCACGCGCC GTTCGTGGCC GCTGCCGGGC CAAAGTTTTT CGGCCTGGAG AGCTTTACCG GGCTGCCGGA CCTGAAGGAC CTGAAGGATC ACTTCGAAGG CCCGCAGTTC GCCAAGTGGC AGAGCTTCCG CCAGTCCGAG GATTCTCGCT ATGTGGCGCT GACCGTCCCG CGATTCCTGC TGCGCACGCC TTACGATCCG GAAGAAAACC CGGTCAAATC GTTCGCCTAC AAGGAGACCG TGGCCAACAG CCACGAGCAC TACCTGTGGG GCAACACCGC CTATGCCTTT GGTACCAGGC TGACCGACAG CTTCGCCAAG TACCGTTGGT GCCCGAACAT CGTCGGGCCG CAGAGCGGCG GCGCGGTGGA GGACTTGCCG CTGCATCACT TCGAAAGCAT GGGCGAGATC GAGACCAAGA TTCCTACCGA GGTGCTGGTG TCCGATCGCC GCGAATTCGA GTTGGCCGAG GAAGGCTTCA TTTCCCTGAC CATGCGCAAG GGTAGCGATA ACGCAGCGTT CTTTTCCGCC AGTTCGGTGC AGAAGCCGAA GTTCTTCGGT ATCAGTGCCG AAGGCAAGGC TGCGGAGCTG AACTACAAGC TCGGTACCCA ACTGCCGTAC ATGATGATCG TCAACCGCCT GGCCCATTAC CTGAAGGTGC TGCAACGCGA GCAACTGGGC TCTTGGAAGG AACGCACCGA CCTGGAACTG GAACTGAACA AGTGGATCCG CCAGTACGTT GCCGACCAGG AAAACCCCAG CGCCGAGGTC CGCGGCCGGC GTCCTCTGCG TGCCGCGCAG ATCATCGTCA GTGATGTCGA GGGTGAGCCG GGCTGGTACC GCGTCAGCTT GAACGTGCGT CCGCACTTCA AGTACATGGG GGCGGACTTC ACCCTGTCGT TGGTCGGCAA GTTGGACAAG GAGTAA
|
Protein sequence | MSTNAAQQNR NENGEYNILD SIIAETRLSP DDEAYDIARR GVSAFIEELL KPQNEGEPVK KAMVDRMIAE IDAKLGSQMD EILHHPDFQA LESAWRGLQL LVDRTNFREN IRIEILSVSK EDLLDDFEDS PEVMQSGLYK HIYTAEYGQF GGQPVGAIIA NYYLSPSSPD VKLMQYVSSV ACMAHAPFVA AAGPKFFGLE SFTGLPDLKD LKDHFEGPQF AKWQSFRQSE DSRYVALTVP RFLLRTPYDP EENPVKSFAY KETVANSHEH YLWGNTAYAF GTRLTDSFAK YRWCPNIVGP QSGGAVEDLP LHHFESMGEI ETKIPTEVLV SDRREFELAE EGFISLTMRK GSDNAAFFSA SSVQKPKFFG ISAEGKAAEL NYKLGTQLPY MMIVNRLAHY LKVLQREQLG SWKERTDLEL ELNKWIRQYV ADQENPSAEV RGRRPLRAAQ IIVSDVEGEP GWYRVSLNVR PHFKYMGADF TLSLVGKLDK E
|
| |