| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3606 |
|---|
| Symbol | |
|---|
| ID | 5359284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 3733401 |
|---|
| End bp | 3733907 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640812656 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_001348960 |
|---|
| Protein GI | 152989564 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3521] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03352] type VI secretion lipoprotein, VC_A0113 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGTC GCCCGATCCC GCCAGCCAGG GCGCTGGCCA TGCTCGCCGT CCTGGCGCTG
CTGGCCGGTT GTTCCACGCT GTCGCCGTAT TCCAGACTGA CCAAGCTCGA CCTCGCCCTG
AGCGCCGGCG AGCGGGTCAA TCCCGACCTC AATGGCCGGC CGTCGCCGGT GGTAGTGCGG
CTGTTCGAGC TGAAGCACCC GGTGGCGTTC GAGAACGCCG ACTTCTTCAG CCTCTACGAA
CGTCCCAAGG AGACCCTGGA CCCCGACCTG GTGACCAGCG AGGAGCTGGA GTTGCGTCCC
GGCGAGCGGG TCGAACTCAA GCTCAGCGTG GAGCAGGGGA GCCGCTACGT GGGCGTGCTC
GCCGCCTACC GCGATCTCGG CGAGGCAAGC TGGCGCTACG TGGTGCCGGT CACGGCGAAA
GAGCTGACCC GGGTAGAGCT GAAGCTGGAC CAGAAGGGCA TCCTGAATGC CGGCGAACTG
CTCGGCAAGG CGGGTGACGC GCGATGA
|
|---|
| Protein sequence | MSRRPIPPAR ALAMLAVLAL LAGCSTLSPY SRLTKLDLAL SAGERVNPDL NGRPSPVVVR
LFELKHPVAF ENADFFSLYE RPKETLDPDL VTSEELELRP GERVELKLSV EQGSRYVGVL
AAYRDLGEAS WRYVVPVTAK ELTRVELKLD QKGILNAGEL LGKAGDAR
|
|---|
| |