| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3584 |
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| Symbol | speE |
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| ID | 5357385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 3713054 |
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| End bp | 3713914 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640812634 |
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| Product | spermidine synthase |
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| Protein accession | YP_001348938 |
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| Protein GI | 152987177 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.641371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATT ATCAGGAAAC TCTGTACCAG GGCTACGGCC AGCGCTTCAG CATCGACAAC
ATGCTGCACG AGGTGCGCAC CGAACATCAG CACCTGGTGA TTTTCGAGAA CGCCCGGATG
GGCCGGGTGA TGGCCCTCGA CGGAGTGATC CAGACCACCG AGGCCGACGA GTTCATCTAC
CACGAGATGC TCACCCACGT GCCGATCCTC GCCCACGGCG CGGCCAGGCG TGTACTGATC
ATCGGCGGCG GCGACGGCGG CATGTTGCGC GAGGTGGCCA AGCACAAGAG CGTGGAGCGG
ATCACCATGG TCGAGATCGA CGGCACCGTG GTCGACATGT GCAAGGAGTT CCTGCCCAAC
CACTCCCAGG GCGCCTTCGA CGATCCGCGG CTGAACCTGG TGATCGACGA CGGCATGCGC
TTCGTGGCTA CCACCGAAGA ACGCTTCGAC GTGATCATTT CCGACTCCAC CGACCCGATC
GGCCCTGGCG AGGTGCTGTT CTCCGAGAAC TTCTACCAGG CCTGCCGGCG CTGCCTGAAC
GAGGGCGGCA TCCTGGTCAC CCAGAACGGC ACGCCGTTCA TGCAACTGGA CGAGGTACGC
ACCACCGCCG GGCGCACCAA TGGCCTGTTC GTCGACTGGC ACTTCTACCA GGCCGCGGTG
CCGACCTATA TCGGCGGCGC CATGACCTTC GCCTGGGGCT CGACCCGCGA GGGCCTGCGT
CACCTGCCGC TGGCGACCCT GCGCCAGCGC TTCCGCGACA GTGGCATCGC CACCCGCTAC
TACAACGCCG ATATCCACCA GGGCGCCTTT GCCTTGCCGC AGTACGTACT GCAGGCCATC
GGCAAGCAGG ACAACGACTG A
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| Protein sequence | MSDYQETLYQ GYGQRFSIDN MLHEVRTEHQ HLVIFENARM GRVMALDGVI QTTEADEFIY
HEMLTHVPIL AHGAARRVLI IGGGDGGMLR EVAKHKSVER ITMVEIDGTV VDMCKEFLPN
HSQGAFDDPR LNLVIDDGMR FVATTEERFD VIISDSTDPI GPGEVLFSEN FYQACRRCLN
EGGILVTQNG TPFMQLDEVR TTAGRTNGLF VDWHFYQAAV PTYIGGAMTF AWGSTREGLR
HLPLATLRQR FRDSGIATRY YNADIHQGAF ALPQYVLQAI GKQDND
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