| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3580 |
|---|
| Symbol | |
|---|
| ID | 5357014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 3707566 |
|---|
| End bp | 3709860 |
|---|
| Gene Length | 2295 bp |
|---|
| Protein Length | 764 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640812630 |
|---|
| Product | periplasmic beta-glucosidase |
|---|
| Protein accession | YP_001348934 |
|---|
| Protein GI | 152985204 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0326173 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGGC TGTGTGTACT GGGGCTTTTC ATCGGGCTGA GCGGGAGCCC GGCACTGGCG
GCAGGCCAGG CTGGATCCGC CGATCCGGCA GCGGATGCCA AGGAGCGTTT CATTTCCACC
CTCATGGCTC GCATGAGCAA CGAGGAAAAG ATCGGCCAGC TGCGCCTGGT CAGCGTCGGC
GCCGACCATC CCAAGGAAGC GCTGATGGCG GACATCCGCG CCGGCAAGGT CGGCGCGATC
TTCAACACGG TGACCCGGCC GGACATCCGC GCGATGCAGG ACCAGGTCCG CCACAGCCGC
CTGAAGATCC CGCTGTTCTA CGCCTACGAC GTGGCCCACG GGCATCGCAC CATCTTCCCC
ATCAGCCTCG GCCTCGCCGC CAGCTGGGAC CCCGAGGTGG TCGCCCGCAG CGCACGGATT
TCCGCGCTGG AGGCCAGCGC CGACGGCCTC GACATGAGTT TCTCGCCGAT GGTCGACATC
ACCCGCGACG CACGCTGGGG ACGGGTCTCG GAAGGCTTCG GCGAAGACAC CTACCTGACC
TCGCTGCTGT CGGGCACGAT GGTCCGCGCC TACCAGGGCA AGGACCTCGC CGCGCCGGAC
AGCATCATGG CGGCGGTCAA GCACTTCGCA CTGTATGGCG CAGCCGAGGG CGGCCGCGAC
TACAACACCG TGGACATGAG CCTGCCGCGC ATGTTCCAGG ACTACCTGCC GCCCTACAAG
GCCGCGGTGG ACGCCGGCGC CGGCGCGGTG ATGGTCTCGC TGAACACCAT CAACGGCGTG
CCCGCCACCG CCAACCGCTG GCTGCTGACC GACCTGCTGC GCCAGCAATG GGGCTTCAAG
GGACTGACCG TCAGCGACCA CGGCGCGGTG AAGGAACTGA TCAAGCACGG CCTCGCCGGC
AACGAGCGGG ACGCCACGCG CCTGGCGATC CAGGCCGGTG TCGACATGAA CATGAACGAT
GATCTCTACT CCACCTGGCT GCCGAAGCTG CTGGCGGCCG GCGAGATCGA CCAGGCCGAC
ATCGATCGCG CCTGCCGCGA CGTGCTGGTG GCGAAGTACG ACCTCGGCCT GTTCGCCGAT
CCCTACCGGC GCCTGGGCAA GCCGGACGAC CCGCCGTTCG ACACCAACGC CGAGAGCCGC
CTGCACCGCC AGGCCGCCCG CGAGGTGGCT CGCGAAGGGC TGGTCCTGTT GAAGAACCGC
GACGGCCTGC TGCCGTTGAA GAAACAGGGG CGGATCGCGG TGATCGGCCC CCTGGCCAAG
AGCCAGCGCG ACGTCATCGG CAGCTGGTCG GCCGCCGGCG TGCCACGCCA GGCGGTGAGC
GTGTACCAAG GCCTGGCCAA CGCCGTCGGC GAGCGCGCCA CCCTCCTCTA TGCCAAGGGC
GCCAATGTCA GCGGCGACCC GGCGATCCTC GACTACCTGA ACAGCTACAA CCCGGAAGTC
GAGGTCGATC CGCGCTCCGC CGAGGCGATG CTCGAGGAGG CCTTGCGCAC CGCGCGCGAC
GCCGACCTGG TGGTCGCTGT GGTCGGCGAA TCGCAGGGCA TGGCCCACGA GGCCTCCAGT
CGCACCGACC TGCGCATCCC GGCCAGCCAG CGGCGGCTGC TGAAGGCACT GAAGGCCACC
GGCAAGCCAC TGGTGCTGGT GCTGATGAAC GGACGCCCGC TGTCGCTGGG CTGGGAGCAG
GAAAACGCCG ATGCGATCCT GGAAACCTGG TTCAGCGGCA CCGAGGGCGG CAACGCCATC
GCCGACGTGC TGTTCGGCGA GCACAACCCC AGCGGCAAGC TGACCATGTC CTTCCCGCGT
TCGGTGGGCC AGGTGCCGGT CTACTACAAC CACCTGAACA CCGGCCGGCC GATGGACCAC
GACAACCCCG GCAAGTACAC CTCGCGCTAC TTCGACGAGG CCAACGGACC GCTCTACCCG
TTCGGCTACG GCCTCAGCTA CACCGAATTC AGCCTCTCGC CACTGCGCCT GTCCAGCGAG
CGCCTGGCCC GCGGCGATAC GCTGGAAGCA CGGGTGACCC TGAAGAACGA TGGCAAGCGC
GCCGGCGCCA CGGTGGTCCA ACTGTACCTG CAGGACCCGG TCGCCAGCCT CAGCCGGCCG
GTGAAGGAAC TGCGCGGTTT CCGCAAGGTG CTGCTGCAGC CAGGCGAGTC CCGCGAGATT
GTCTTCACCC TCGGCGAGGC GGACCTGAAG TTCTACGACA GCCAGCTCAG GCACGCTGCC
GAGCCAGGCG AGTTCAAGGT CTTCGTCGGC CTGGACTCGG CAAAGGTCGA GGAAGGGCGC
TTCACCCTGC TCTGA
|
|---|
| Protein sequence | MNRLCVLGLF IGLSGSPALA AGQAGSADPA ADAKERFIST LMARMSNEEK IGQLRLVSVG
ADHPKEALMA DIRAGKVGAI FNTVTRPDIR AMQDQVRHSR LKIPLFYAYD VAHGHRTIFP
ISLGLAASWD PEVVARSARI SALEASADGL DMSFSPMVDI TRDARWGRVS EGFGEDTYLT
SLLSGTMVRA YQGKDLAAPD SIMAAVKHFA LYGAAEGGRD YNTVDMSLPR MFQDYLPPYK
AAVDAGAGAV MVSLNTINGV PATANRWLLT DLLRQQWGFK GLTVSDHGAV KELIKHGLAG
NERDATRLAI QAGVDMNMND DLYSTWLPKL LAAGEIDQAD IDRACRDVLV AKYDLGLFAD
PYRRLGKPDD PPFDTNAESR LHRQAAREVA REGLVLLKNR DGLLPLKKQG RIAVIGPLAK
SQRDVIGSWS AAGVPRQAVS VYQGLANAVG ERATLLYAKG ANVSGDPAIL DYLNSYNPEV
EVDPRSAEAM LEEALRTARD ADLVVAVVGE SQGMAHEASS RTDLRIPASQ RRLLKALKAT
GKPLVLVLMN GRPLSLGWEQ ENADAILETW FSGTEGGNAI ADVLFGEHNP SGKLTMSFPR
SVGQVPVYYN HLNTGRPMDH DNPGKYTSRY FDEANGPLYP FGYGLSYTEF SLSPLRLSSE
RLARGDTLEA RVTLKNDGKR AGATVVQLYL QDPVASLSRP VKELRGFRKV LLQPGESREI
VFTLGEADLK FYDSQLRHAA EPGEFKVFVG LDSAKVEEGR FTLL
|
|---|
| |